DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1607 and SSY1

DIOPT Version :9

Sequence 1:NP_001263139.1 Gene:CG1607 / 43707 FlyBaseID:FBgn0039844 Length:507 Species:Drosophila melanogaster
Sequence 2:NP_010444.1 Gene:SSY1 / 851738 SGDID:S000002567 Length:852 Species:Saccharomyces cerevisiae


Alignment Length:613 Identity:113/613 - (18%)
Similarity:213/613 - (34%) Gaps:178/613 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 NSSRKSSIVNGNGDASAK-----LTNGDGDGGGDG---GGEVT-----------------LKAKM 49
            |:|.::..::.|.|.:.|     ..|..|..|.:.   ||.:.                 ::.|:
Yeast   217 NASYRNIAIDENVDITHKEHAIDEINEQGASGSESVVEGGSLLHDIEKVFNRSRATRKYHIQRKL 281

  Fly    50 SLLNGCTVIVGSIIGSGIFVS---------PTGVLM---YTGSVNLALIVWVISGLFSMVGAYCY 102
            .:.:...:.:|:....|:|::         |.|.|:   .|||:.||.::             .:
Yeast   282 KVRHIQMLSIGACFSVGLFLTSGKAFSIAGPFGTLLGFGLTGSIILATML-------------SF 333

  Fly   103 AELGTMITK----SGADYAYIMETFGPFMAFIRLWIECMIVRPCSQAIVALTFSTYVLKPFFPEC 163
            .||.|:|..    ||....::.:.|| |......||.||:..|..     ::.||:.|..:....
Yeast   334 TELSTLIPVSSGFSGLASRFVEDAFG-FALGWTYWISCMLALPAQ-----VSSSTFYLSYYNNVN 392

  Fly   164 TPPEDSARLLAVCCILVLTLINCWDVKWATAVQDIFTYAKLLALFIIIATGVYQLYLGNTQY--- 225
            .....:|..:.:.....: ::|..||    ::.....|...::..||....|:.:.:.|..:   
Yeast   393 ISKGVTAGFITLFSAFSI-VVNLLDV----SIMGEIVYVAGISKVIIAILMVFTMIILNAGHGND 452

  Fly   226 ------FTFENTDTKVTSIALSFY-----------------SG---------------LFAYNGW 252
                  |.:.::...|.::....|                 ||               .||::|.
Yeast   453 IHEGVGFRYWDSSKSVRNLTYGLYRPTFDLADAGEGSKKGISGPKGRFLATASVMLISTFAFSGV 517

  Fly   253 NYLNFIIEELKDPVKNLPRAIAISCTLVTIVYVM----ANVSFYT----ILS--P-------DEV 300
            ........|..:|.|.:|.|...:.::|.|.||.    ..::.|:    :||  |       :.:
Yeast   518 EMTFLASGEAINPRKTIPSATKRTFSIVLISYVFLIFSVGINIYSGDPRLLSYFPGISEKRYEAI 582

  Fly   301 MGSSAV----------AVTYAERAFGMLAWTIPVFVALSTFG------AVNGILL---------- 339
            :..:.:          .:.|.:.:.| ..::.|..|||..||      |.|.||:          
Yeast   583 IKGTGMDWRLRTNCRGGIDYRQISVG-TGYSSPWVVALQNFGLCTFASAFNAILIFFTATAGISS 646

  Fly   340 --TSSRLFYAGANNGQMPEILTMIQIQRFTPTPAVLAMALLSMLYLTVSDIFALINYVGFATWLS 402
              :.||..||.:...:.|.:..:.. :|..|..:|:..:|.|::.....|..|:.|:...|...|
Yeast   647 LFSCSRTLYAMSVQRKAPPVFEICS-KRGVPYVSVIFSSLFSVIAYIAVDQTAIENFDVLANVSS 710

  Fly   403 IGVAV----LCLPWLRWAQPNLPRP---IRVPMVFPIVYLIATIFVTVVPMYASPVETGYGILMI 460
            ...::    |.|.:||:......|.   .|....:|               |.||.:. |..:..
Yeast   711 ASTSIIWMGLNLSFLRFYYALKQRKDIISRNDSSYP---------------YKSPFQP-YLAIYG 759

  Fly   461 LSSIPVYLVFIAWKN--KPIWFQKTMVS 486
            |....::::|:.:.|  ...|..|...|
Yeast   760 LVGCSLFVIFMGYPNFIHHFWSTKAFFS 787

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1607NP_001263139.1 2A0308 42..501 CDD:273332 103/573 (18%)
SSY1NP_010444.1 2A0310 278..819 CDD:273334 103/552 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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