DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1607 and UGA4

DIOPT Version :9

Sequence 1:NP_001263139.1 Gene:CG1607 / 43707 FlyBaseID:FBgn0039844 Length:507 Species:Drosophila melanogaster
Sequence 2:NP_010071.1 Gene:UGA4 / 851317 SGDID:S000002369 Length:571 Species:Saccharomyces cerevisiae


Alignment Length:514 Identity:110/514 - (21%)
Similarity:185/514 - (35%) Gaps:134/514 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 GNGDA----SAKLTNGDGDGGGDGGGEVTLKAKMSLLN---------GCTVIVGSIIGSGIFVSP 71
            |.|:.    :||..| |.....:.|.:..||.:.|.|.         |....:.|::|.|:...|
Yeast    42 GAGEVNYIDAAKSVN-DNQLLAEIGYKQELKRQFSTLQVFGIAFSIMGLLPSIASVMGGGLGGGP 105

  Fly    72 TGVLMYTGSVNLALIV--WVISGLFSMVGAYCYAELGTMITKSGA----DYAYIMETFGPFMAFI 130
                        |.:|  |.::..|.::.....||..:.|..:|.    .|.|..|.:...::||
Yeast   106 ------------ATLVWGWFVAAFFILLVGITMAEHASSIPTAGGLYYWTYYYAPEGYKEIISFI 158

  Fly   131 RLWIEC-----MIVRPCS---------QAIVALTFSTYVLKPFFPECTPPEDSARLLAVC--CIL 179
               |.|     :....||         .|.|.||      |....|.|    |.:|..:.  .::
Yeast   159 ---IGCSNSLALAAGVCSIDYGLAEEIAAAVTLT------KDGNFEVT----SGKLYGIFAGAVV 210

  Fly   180 VLTLINCWDVKWATAVQDIFTYAKL---LALFIIIATGVYQLYLG-NTQYFTF---ENTDTKVTS 237
            |:.:..|........:|.:..:|.|   :.|||.:..|......| |...|.|   ||       
Yeast   211 VMCICTCVASGAIARLQTLSIFANLFIIVLLFIALPIGTKHRMGGFNDGDFIFGKYEN------- 268

  Fly   238 IALSFYSGLFAYNGWNY--LNFI---------------IEELKDPVKNLPRAIAISCTLVTIVYV 285
              ||.::     |||.:  ..|:               .||.||..|::|..|..|..:..|:..
Yeast   269 --LSDWN-----NGWQFCLAGFMPAVWTIGSFDSCVHQSEEAKDAKKSVPIGIISSIAVCWILGW 326

  Fly   286 MANVSFYTILSPD-EVMGSSAVAVTYAERAFGMLA--WTIPVFVALSTF-----GAVNGILLTSS 342
            :..:.....::|| :.:..|......|:..:..|.  |.| .|::|..|     ||  .|....|
Yeast   327 LIIICLMACINPDIDSVLDSKYGFALAQIIYDSLGKKWAI-AFMSLIAFCQFLMGA--SITTAVS 388

  Fly   343 RLFYAGANNGQMP--EILTMIQIQRFTPTPAVLAMALLSMLYLTVSDIFALINYVGFATWLSIGV 405
            |..:|.:.:..:|  :.:..:..:...|..|:||..:.|:    :..:..||:........|:.|
Yeast   389 RQVWAFSRDNGLPLSKYIKRVDSKYSVPFFAILAACVGSL----ILGLLCLIDDAATDALFSLAV 449

  Fly   406 AVLCLPWLRWAQPNL-----------PRPIRVPMVF-PIVY---LIATIFVTVVPMYAS 449
            |.   ..|.|:.|.:           |.|..:..:: |||.   :...:|:.::.|:.|
Yeast   450 AG---NNLAWSTPTVFRLTSGRDLFRPGPFYLGKIWSPIVAWTGVAFQLFIIILVMFPS 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1607NP_001263139.1 2A0308 42..501 CDD:273332 103/488 (21%)
UGA4NP_010071.1 2A0304 61..529 CDD:273331 104/494 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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