DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1607 and AGP3

DIOPT Version :9

Sequence 1:NP_001263139.1 Gene:CG1607 / 43707 FlyBaseID:FBgn0039844 Length:507 Species:Drosophila melanogaster
Sequence 2:NP_116600.1 Gene:AGP3 / 850489 SGDID:S000001839 Length:558 Species:Saccharomyces cerevisiae


Alignment Length:495 Identity:104/495 - (21%)
Similarity:186/495 - (37%) Gaps:132/495 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 VGSIIGSGIFVSPTGVLMYTGSVNLALIVWVISGLFSMVGAYCYA---ELGTMITKSGADYAYIM 120
            :|.:||.|..|.....|...|.  |||::.     ||::|...::   .:|.|||        :.
Yeast    63 LGGVIGPGCLVGAGNALNKGGP--LALLLG-----FSIIGIIAFSVMESIGEMIT--------LY 112

  Fly   121 ETFGPFMAFIRLWIECMIVRPCSQAIVALTFSTYVLKPFFPECTPPEDSARLLAVCCILVLTLIN 185
            .:.|.|....|.:....:...|..|.|.:.|:                   :||.....:.:::.
Yeast   113 PSGGGFTTLARRFHSDALPAVCGYAYVVVFFA-------------------VLANEYNTLSSILQ 158

  Fly   186 CWDVKWATAVQDIFTYAKLL------ALFIIIATGVYQLYLGNTQY------------------- 225
            .|.       ..:..|..:|      .:|.::..|::    |.|:|                   
Yeast   159 FWG-------PQVPLYGYILIFWFAFEIFQLVGVGLF----GETEYWLAWLKIVGLVAYYIFSIV 212

  Fly   226 -------------FTFENTDTKVT----SIALSFYSGLFAYNGWNYLNFIIEELKDPVKNLPRAI 273
                         |.:.|:...::    .||:.|......|:|...:.....|.|:|.|.:|.|:
Yeast   213 YISGDIRNRPAFGFHYWNSPGALSHGFKGIAIVFVFCSTFYSGTESVALAATESKNPGKAVPLAV 277

  Fly   274 AISCTLVTIVYVMANVSFY--TILSPDEVMGSS--------AVAVTYAERAFGMLAWTIPVFVAL 328
            ..:...:.:||:...| ||  |:...|..:.:|        |:|::.|..|.|  |..:..|:.:
Yeast   278 RQTLWRILVVYIGIAV-FYGATVPFDDPNLSASTKVLKSPIAIAISRAGWAGG--AHLVNAFILI 339

  Fly   329 STFGAVNGILLTSSRLFYAGANNGQMPEILTMIQIQRFTPTPAVL---AMALLSMLYLTVSDIFA 390
            :...|:||.|...||.....|:.|..|:||.... :|..|.||:.   |:.|:|::.::|....|
Yeast   340 TCISAINGSLYIGSRTLTHLAHEGLAPKILAWTD-RRGVPIPAITVFNALGLISLMNVSVGAANA 403

  Fly   391 ---LINYVG---FATWLSIGVAVLCLPWLR----W-AQPNLPRPIRVPMVF----PIVYLIATIF 440
               ::|..|   |..|     .|:....||    | ||......:....:|    |::.|.|.||
Yeast   404 YSYIVNLSGVGVFIVW-----GVISYTHLRIRKAWVAQGRSIEELPYEALFYPWTPVLSLAANIF 463

  Fly   441 VTVVP--MYASPVETGYGI---LMILSSIPVYLVFIAWKN 475
            :.::.  .|..|.:.|..:   :::...|.:|:....:|:
Yeast   464 LALIQGWSYFVPFDAGNFVDAYILLPVGILLYIGICVFKS 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1607NP_001263139.1 2A0308 42..501 CDD:273332 104/495 (21%)
AGP3NP_116600.1 2A0310 50..517 CDD:273334 104/495 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53617
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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