DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1607 and Slc7a3

DIOPT Version :9

Sequence 1:NP_001263139.1 Gene:CG1607 / 43707 FlyBaseID:FBgn0039844 Length:507 Species:Drosophila melanogaster
Sequence 2:NP_058913.1 Gene:Slc7a3 / 29485 RGDID:68342 Length:619 Species:Rattus norvegicus


Alignment Length:563 Identity:110/563 - (19%)
Similarity:217/563 - (38%) Gaps:128/563 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 GGGEVTLKAKMSLLNGCTVIVGSIIGSGIFVSPTGVLMYTGSVNLALIVWVISGLFSMVGAYCYA 103
            |.||..|...:|.|:...:.|||.:|:|::|....|.......:: :|.::::.|.|::...|||
  Rat    22 GMGETRLARCLSTLDLVALGVGSTLGAGVYVLAGEVAKEKAGPSI-VICFLVAALSSVLAGLCYA 85

  Fly   104 ELGTMITKSGADYAYIMETFGPFMAFIRLW--------------------IECMIVRPCSQAI-- 146
            |.|..:..||:.|.|...|.|...||...|                    .:.:|....||.:  
  Rat    86 EFGARVPGSGSAYLYSYVTVGELWAFTTGWNLILSYVIGTASVARAWSSAFDNLIGNHISQTLKG 150

  Fly   147 VALTFSTYVLKPFFPECTPPEDSARLLAVCCILVLTLINCWDVKWATAVQDIFTYAKLLALFIII 211
            ..|....:||..:      |:    ..|:..:|:||.:.......:..|..:||...||.|..:|
  Rat   151 TILLNMPHVLAEY------PD----FFALALVLLLTGLLVLGANESGLVTKVFTGMNLLVLGFVI 205

  Fly   212 ATGVYQLYLGN----TQYFTFENTDTKVTSIALSFYSG-----------------LFAYNGWNYL 255
            .:|..:..|.|    .:.:....:::..|....|..||                 .:|:.|::.:
  Rat   206 ISGFIKGELRNWKLTKEDYCLTMSESNGTCSLDSMGSGGFMPFGLEGILRGAATCFYAFVGFDCI 270

  Fly   256 NFIIEELKDPVKNLPRAIAISCTLVTIVYVMANVSF-----YTILSPDEVMGSSAVAVTYAERAF 315
            ....||.::|.:::|..|.||.::..:.|...:.:.     |..|.|:..:          ..||
  Rat   271 ATTGEEAQNPQRSIPMGIVISLSICFLAYFGVSSALTLMMPYYKLQPESPL----------PEAF 325

  Fly   316 GMLAW-------TIPVFVALSTFGAVNGILLTSSRLFYAGANNGQMPEILTMIQIQRFTPTPAVL 373
            ..:.|       .|....||||  ::.|.:....|:.||.|.:|.:..:|..:.....||..|.:
  Rat   326 TYVGWEPARYLVAIGSLCALST--SLLGSMFPMPRVIYAMAEDGLLFRVLARVHNGTHTPIVATV 388

  Fly   374 AMALLSMLYLTVSDIFALINYVGFATWLSIGVAVLCLPWLRWAQP-------------------- 418
            ...:::.....:.::..|::.:...|.|:..:..:|:..||: ||                    
  Rat   389 VSGVIAAFMAFLFELTDLVDLMSIGTLLAYSLVSICVLILRY-QPDQEMKNGEEEVELQEERTLE 452

  Fly   419 --------------NLPRPIRVPMVFPIVYLIA---TIFVTVVPMYASPVETG----YGILMILS 462
                          ::|..:...:|:....|:|   |:...|:..:.:|:.:|    ..:::::.
  Rat   453 AEKLTVQALFCQVDSIPTLLSGRIVYVCSSLLAVLLTVLCLVLTWWTTPLHSGDPVWVTVVVLIL 517

  Fly   463 SIPVYLVFIAWK----NKPIWFQKTMVSL----TRFLQKMLMV 497
            .:.:.:..:.|:    ..|:.|:..:|.|    :.|:...||:
  Rat   518 GLILGISGVIWRQPQNRTPLHFKVPVVPLLPLVSIFVNVYLMM 560

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1607NP_001263139.1 2A0308 42..501 CDD:273332 108/560 (19%)
Slc7a3NP_058913.1 2A0303 4..591 CDD:273330 110/563 (20%)
AA_permease_C <551..589 CDD:290617 3/10 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166351229
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53617
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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