DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1607 and per1

DIOPT Version :9

Sequence 1:NP_001263139.1 Gene:CG1607 / 43707 FlyBaseID:FBgn0039844 Length:507 Species:Drosophila melanogaster
Sequence 2:NP_594316.1 Gene:per1 / 2541596 PomBaseID:SPAP7G5.06 Length:583 Species:Schizosaccharomyces pombe


Alignment Length:526 Identity:120/526 - (22%)
Similarity:201/526 - (38%) Gaps:101/526 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 DGGGEVTLKAKMSLLNGCTVIVGSIIGSGIFVSPTGVLMYTGSVNLALIVWVISGLFSMVGAYCY 102
            ||   |.||..:...:...:.:|..||:|:||. :|..:..|.....:|.:.:.|:......|..
pombe    76 DG---VALKRHLKGRHMQMIAIGGAIGTGLFVG-SGSSLADGGPASVIIDYTLIGIMMFFTVYAL 136

  Fly   103 AELGTMITKSGADYAYIMETFGPFMAFIRLW---IECMIVRPCSQAIVALTFSTYVLKPFFPECT 164
            .||......:|..|.|.:....|...|...|   :...:..|......|:||..:.         
pombe   137 GELAVSYPVAGGFYNYAVRFIDPAWGFAVGWNYFMNYFVTFPLELTTCAITFRYWT--------- 192

  Fly   165 PPEDSARLLAVCCILVLTLINCWDVKWATAVQDIFTYAKLLAL--FIIIAT-----GV---YQLY 219
             ..:|...:.:..:.|: .||.:.|:....|:.|.:..|::|.  |||:|.     ||   .:.|
pombe   193 -DINSCAWITIFLVFVI-CINLFGVRGYGEVEFILSTLKVVATTGFIILAIIINCGGVPTDPRGY 255

  Fly   220 LGN--TQYFTFENTDTKVTSIALSFYSGLFAYNGWNYLNFIIEELKDPVKNLPRAIAISCTLVTI 282
            :|.  .:...|.::.....|:   |.:..|:::|...:.....|.:||.|:||||.......:.|
pombe   256 IGGKIIKNKPFRHSFKGFCSV---FTTAGFSFSGTEVVGLAAAEAEDPQKSLPRATKQVFWRIAI 317

  Fly   283 VYVMANVSFYTILSPDE--VMGSSA------VAVTYAERAFGMLAWTIPVFVALSTFGAVNGILL 339
            .||::.:....::|||:  :||:|:      ..:...|.....|.......:.:||....|....
pombe   318 FYVVSLILIGLLVSPDDPRLMGNSSDGSTSPFVLAIKEANIRGLPSVFNAVIIISTVSVANSCTF 382

  Fly   340 TSSRLFYAGANNGQMPEILTMIQIQRFTPTPAVLAMALLSMLYLTVSDIFALINYVG-------- 396
            |:||..:|.|..|..|         ||......|...||:|....:...||.||..|        
pombe   383 TASRTLHAMAAKGDAP---------RFFAYTDRLGRPLLAMAVCLLFGFFAYINAAGDVSDTVFD 438

  Fly   397 ----------FATWLSIGVAVLCLPWLRWAQPNLPRPI--------------RVPMVFPIVYLIA 437
                      |.:|.||.   ||....|.|.....|.:              .:.:.|.|:.|:|
pombe   439 WLLAISGISNFFSWGSIN---LCHIVFRLAMKKQGRSLDQLGFVSPMGIWGSAIGLAFNILCLMA 500

  Fly   438 TIFVTVVPMYASPVET----GYGILMILSSIPVYLVFIAWKNKPIWFQKTMVSLTRFLQKMLMVL 498
            ..:|::.|:.:.|...    ||     |::..|...||.:|   |:.:..:.||:    |:.:..
pombe   501 EFYVSLFPIGSKPNANDFFQGY-----LAAPIVIAFFIGYK---IYDRSHIPSLS----KLDLDT 553

  Fly   499 GKQTKP 504
            |.:|.|
pombe   554 GLRTYP 559

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1607NP_001263139.1 2A0308 42..501 CDD:273332 116/517 (22%)
per1NP_594316.1 LysP 35..582 CDD:223903 120/526 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 68 1.000 Domainoid score I2720
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 68 1.000 Inparanoid score I1939
OMA 1 1.010 - - QHG53617
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2200
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.090

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