Protein Alignment pHCl-2 and glra4a

DIOPT Version :9

• Sequence 1: NP_001303470.1
• Gene: pHCl-2 / 43703
• FlyBaseID: FBgn0039840
• Length: 526
• Species: Drosophila melanogaster
• Sequence 2: XP_005169655.1
• Gene: glra4a / 83413
• ZFINID: ZDB-GENE-010410-3
• Length: 457
• Species: Danio rerio
• Alignment Length: 504
• Identity: 132/504 - (26%)
• Similarity: 222/504 - (44%)
• Gaps: 87/504 - (17%)

  Fly    21 VHLGDLQQNLAANGSVVVSPLNTTDAFSVSINLSQSTVNNCPSLKNAESMALMELLTRLTAPCRY 85
            :.||..::.:.::......|::.:|                         .|.:|:.|.:.   |
Zfish    22 IRLGSCKEEIKSSSRPAQKPMSPSD-------------------------FLDKLMGRTSG---Y 58

  Fly    86 DRMVPPVVHNKDGEEVPMDIYARFYIYVMKNLDSSDLQFTVQGLLQLRYLDPRLAFSSYLPNRR- 149
            |..:.|   |..|.  |:::....:|....::..:.:.:.:...|:.::.|||||:|.| |:..
Zfish    59 DARIRP---NFKGP--PVNVTCNIFINSFGSITETTMDYRLNVFLRQQWNDPRLAYSEY-PDASL 117

  Fly   150 --QPIMGESELKKMLWVPHIFLTNEQASTVLGTSAKDELTSIYPNGTVLTSTRLQATLYCWMNFQ 212
              .|.|.:|     :|.|.:|..||:.:.....:..::|..|:.||.||.|.||...|.|.|:.:
Zfish   118 DLDPSMLDS-----IWKPDLFFANEKGANFHEVTTDNKLLRIFQNGNVLYSIRLTLILSCPMDLK 177

  Fly   213 KFPFDEQKCKTTLESWMYNTTLVQLHWETDNPVSFDKQLQLTEYNLIGSLYNESIRVSNESYMSH 277
            .||.|.|.|...|||:.|....:...|.:||||.....|.|.::.|     .|.   .:..|.:.
Zfish   178 NFPMDIQTCTMQLESFGYTMNDLIFEWLSDNPVQVADDLTLPQFVL-----KEE---KDLGYCTK 234

  Fly   278 GSLEGNYSIISFTVLLTREVGYYVIDYFLPSIMIVTISWVSFWLQADQTPARTTLGCTTLLSFIT 342
            ....|.::.|.....|.|::|||:|..::||::||.:||||||:..|..|||..||.||:|:..|
Zfish   235 HYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTT 299

  Fly   343 LSLSQENNLMKVSYVTMSEVWFLVCTIFIFGSLVEFAFVNTIWRRNND-LQLKKRTTKYIVKSTF 406
            .|.....:|.|||||...::|..||.:|:|.:|:|:|.||.:.|::.: ::|:|:..:..::...
Zfish   300 QSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSRQHKEFIRLRKKQRRQRIEEEL 364

  Fly   407 VPHLKKHRRHGYRRTDSTMSTMSTTSMDKTCGPNNTVITIETPIIIGGSLSREDSAISLDEQDET 471
            |...:.....||                   |..:.:.|.:...:.|.|:......:.:....|.
Zfish   365 VRESRGFYFRGY-------------------GLGHCLQTKDGTAVEGSSVFAPPPPVQVLYDGEA 410

  Fly   472 STSESSDSSKEKPAQTFATMTPKEVSLWIDRKMRFVFPLSFIVFNALFW 520
            ......|.:|.                 ||...|.||||||::||..:|
Zfish   411 VRKRFVDRAKR-----------------IDTISRAVFPLSFLIFNVFYW 442

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pHCl-2	NP_001303470.1	LIC	46..522	CDD:273305	128/479 (27%)
glra4a	XP_005169655.1	LIC	27..445	CDD:273305	130/499 (26%)
		Neur_chan_LBD	48..254	CDD:280998	62/227 (27%)
		Neur_chan_memb	261..442	CDD:280999	61/216 (28%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3644
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR18945
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	3	2.910