Protein Alignment pHCl-2 and glrba

DIOPT Version :9

• Sequence 1: NP_001303470.1
• Gene: pHCl-2 / 43703
• FlyBaseID: FBgn0039840
• Length: 526
• Species: Drosophila melanogaster
• Sequence 2: NP_571856.1
• Gene: glrba / 83412
• ZFINID: ZDB-GENE-010410-2
• Length: 498
• Species: Danio rerio
• Alignment Length: 483
• Identity: 131/483 - (27%)
• Similarity: 229/483 - (47%)
• Gaps: 46/483 - (9%)

  Fly    61 CPSLKNAESM------ALMELLTRLTAPCRYDRMVPPVVHNKDGEEVPMDIYARFYIYVMKNLDS 119
            |||..:||.:      :...:|.||.  ..||..:.|   |..|  :|::.....:|....::..
Zfish    39 CPSQLSAEDLDRVPANSTSNILNRLL--MTYDSRIRP---NFKG--IPVEDKVNIFINSFGSIQE 96

  Fly   120 SDLQFTVQGLLQLRYLDPRLAFSSYLPN--RRQPIMGESELKKMLWVPHIFLTNEQASTVLGTSA 182
            :.:.:.|...|:.|:.||||.    ||.  :...:..:.::.:.||.|.:|..||:.:.....:.
Zfish    97 TTMDYRVNIFLRQRWNDPRLR----LPTDFKSDALTVDPKMFQCLWKPDLFFANEKNANFHDVTQ 157

  Fly   183 KDELTSIYPNGTVLTSTRLQATLYCWMNFQKFPFDEQKCKTTLESWMYNTTLVQLHWETDNPVSF 247
            ::.|..|:.||.||.|.||..||.|.:..|.||.|.|.||..|||:.|.|..:...|::.:||..
Zfish   158 ENILLFIFRNGDVLISMRLSVTLSCPLALQLFPMDTQYCKMQLESFGYTTKDLVFMWQSGDPVQM 222

  Fly   248 DKQLQLTEYNLIGSLYNESIRVSNESYMSHGSLEGNYSIISFTVLLTREVGYYVIDYFLPSIMIV 312
            | ::.|.:::    :..|.|:.:|.:....|:  |.|:.:.....|.|:||:|::..:.|:::||
Zfish   223 D-EIALPQFD----VKQEDIKYANCTKFYPGT--GYYTCVEVIFTLRRQVGFYMMGVYAPTLLIV 280

  Fly   313 TISWVSFWLQADQTPARTTLGCTTLLSFITLSLSQENNLMKVSYVTMSEVWFLVCTIFIFGSLVE 377
            .:||:|||:..|.:.||..||..::||..:...|..:.|.|||||...::|.:.|.::.|.||||
Zfish   281 VLSWLSFWINPDASAARVPLGILSVLSLSSECTSLASELPKVSYVKAIDIWMIACLLYGFASLVE 345

  Fly   378 FAFVNTIWRRNNDLQLKK----RTTKYIVKSTFVPHLKKHRRHGYRRTDSTMSTMSTTS--MDKT 436
            :|.|..:......::.:|    ...|...|....| .|.:..:|...|...:||:....  ..|.
Zfish   346 YAVVQVMLNSPKRIEAEKIKMAEKEKAREKENKTP-AKTNSANGTGGTPIHVSTLQVVENRCKKV 409

  Fly   437 CGPNNTVITIETPIIIGGSLSREDSAISLD-------EQDETSTSESSDSSKEKPAQTFATMTPK 494
            |...:.:.:.:..|:  |||.|:....:.|       ..|.:...::.::.|..|.:.......|
Zfish   410 CTSKSDLRSNDFSIV--GSLPRDFELSNFDCYGKPIEVTDASGKPQNKNNKKPAPPKPVIPSAAK 472

  Fly   495 EVSLWIDRKMRFVFPLSFIVFNALFWTL 522
            .|.|:    .|.:||.:|:.||.::|::
Zfish   473 RVDLY----ARALFPFTFLFFNVIYWSV 496

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pHCl-2	NP_001303470.1	LIC	46..522	CDD:273305	131/481 (27%)
glrba	NP_571856.1	LIC	52..497	CDD:273305	126/470 (27%)
		Neur_chan_LBD	59..265	CDD:280998	62/223 (28%)
		Neur_chan_memb	272..494	CDD:280999	60/228 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3644
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR18945
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	4	3.910