DRSC/TRiP Functional Genomics Resources

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Protein Alignment pHCl-2 and gabrg2

DIOPT Version :9

Sequence 1:NP_001303470.1 Gene:pHCl-2 / 43703 FlyBaseID:FBgn0039840 Length:526 Species:Drosophila melanogaster
Sequence 2:XP_031754595.1 Gene:gabrg2 / 779514 XenbaseID:XB-GENE-5949005 Length:505 Species:Xenopus tropicalis


Alignment Length:448 Identity:111/448 - (24%)
Similarity:190/448 - (42%) Gaps:67/448 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 YDRMVPPVVHNKDGEEVPMDIYARFYIYVMKNLDSSDLQFTVQGLLQLRYLDPRLAFSSYLPNRR 149
            ||..:.|.:..|     |..|:...|:..:..:::.::::|:.......:.|.||.|:|.:...|
 Frog   107 YDNKLRPDIGVK-----PTVIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYDRRLKFNSTIKVLR 166

  Fly   150 QPIMGESELKKMLWVPHIFLTNEQASTVLGTSAKDELTSIYPNGTVLTSTRLQATLYCWMNFQKF 214
            .    .|.:...:|:|..|..|.:.:.....:..:.:..|:.:|.||.:.||.....|.:....|
 Frog   167 L----NSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLRLTIDAECQLQLHNF 227

  Fly   215 PFDEQKCKTTLESWMYNTTLVQLHWETDN-PVSFDKQLQLTEYNLIGSLYNESIRVSNESYMSHG 278
            |.||..|.....|:.|....:...|:..: .|...:..:|.:::.:| |.|.:..|...|     
 Frog   228 PMDEHSCPLEFSSYGYPKEEIIYQWKRSSVEVGDVRSWRLYQFSFVG-LRNTTEEVKTTS----- 286

  Fly   279 SLEGNYSIISFTVLLTREVGYYVIDYFLPSIMIVTISWVSFWLQADQTPARTTLGCTTLLSFITL 343
               |:|.:::....|:|.:||:.|..::|..:||.:||||||:..|..||||:||.||:|:..||
 Frog   287 ---GDYVVMTVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMTTL 348

  Fly   344 SLSQENNLMKVSYVTMSEVWFLVCTIFIFGSLVEFAFVNTIWRRNNDLQLKKRTTKYIVKSTFVP 408
            |.....:|.||||||..:::..||.||:|.:|:|:.                 |..|     ||.
 Frog   349 STIARKSLPKVSYVTAMDLFVSVCFIFVFAALMEYG-----------------TLHY-----FVS 391

  Fly   409 HLKKHRRHGYRRTDSTMSTMSTTSMDKTCGPNNTVITIETPIIIGGSLSREDSAISLDEQDETST 473
            :.|..:....::.:..:...|..:......|.:..|.:             ::|..|.|:||...
 Frog   392 NRKPSKDKEKKKKNPLLWMFSFKAPTIDIRPRSATIQM-------------NNATHLQERDEEYG 443

  Fly   474 SESSDSSKEKPAQTFATMTPKEVSLW-----------IDRKMRFVFPLSFIVFNALFW 520
            .|..|.  :..|..|..........|           ||...|..||.:|.:||.::|
 Frog   444 YECLDG--KDCASFFCCFEDCRTGAWRHGRIHIRVAKIDSYSRIFFPTAFCLFNLVYW 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pHCl-2NP_001303470.1 LIC 46..522 CDD:273305 111/448 (25%)
gabrg2XP_031754595.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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