Protein Alignment pHCl-2 and gabrd

DIOPT Version :10

• Sequence 1: NP_651861.1
• Gene: pHCl-2 / 43703
• FlyBaseID: FBgn0039840
• Length: 526
• Species: Drosophila melanogaster
• Sequence 2: XP_700099.5
• Gene: gabrd / 571422
• ZFINID: ZDB-GENE-081105-170
• Length: 459
• Species: Danio rerio
• Alignment Length: 440
• Identity: 110/440 - (25%)
• Similarity: 211/440 - (47%)
• Gaps: 70/440 - (15%)

  Fly   102 PMDIYARFYIYVMKNLDSSDLQFTVQGLLQLRYLDPRLAFSSYLPNRRQPIMG-ESELKKMLWVP 165
            |:::.....:..:.::..:::::|:...|:..:.|.||::     |.....:| :|.....||:|
Zfish    64 PVNVAMAIEVASIDHISEANMEYTMTVFLRQSWRDDRLSY-----NHTNKTLGLDSRFVDKLWLP 123

  Fly   166 HIFLTNEQASTVLGTSAKDELTSIYPNGTVLTSTRLQATLYCWMNFQKFPFDEQKCKTTLESWMY 230
            ..|:.|.:::.....:.:::|..:.|:|.:|.|:|:.:|:.|.|:..|:|.|||:|...|||:.|
Zfish   124 DTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSSRITSTVACDMDLTKYPMDEQECMLDLESYGY 188

  Fly   231 NTTLVQLHWETDNPV--SFDK----QLQLTEYNLIGSLYNESIRVSNESYMSHGSLEGNYSIISF 289
            ::..:..||.....:  ..||    |..:|:|..:..:.|         :.|    .|.:..:|.
Zfish   189 SSEDIVYHWSESQKLIHGLDKLELSQFTITDYRFVTEMMN---------FKS----AGRFPRLSL 240

  Fly   290 TVLLTREVGYYVIDYFLPSIMIVTISWVSFWLQADQTPARTTLGCTTLLSFITLSLSQENNLMKV 354
            ...|.|..|.|:|..::|||::|.:||||||:.....|||.:||.||:|:..||.:|..::|.:.
Zfish   241 RFQLRRNRGVYIIQSYMPSILLVAMSWVSFWISQSAVPARVSLGITTVLTMTTLMVSARSSLPRA 305

  Fly   355 SYVTMSEVWFLVCTIFIFGSLVEFAFV--NTIWRRNNDLQLK-KRTTKYIVKSTFVPHLKKHRRH 416
            |.:...:|:|.:|.:|:|.:|:|:||.  |..:.:....::| .:..:.:||:
Zfish   306 SAIKALDVYFWICYVFVFAALIEYAFAHYNADYSKKEKAKVKTNKNAESMVKN------------ 358

  Fly   417 GYRRTDSTMSTMSTTSMDKTCGPNNTVITIETPIIIGGSLSR-----EDSAISLDEQDETSTSES 476
              .:....:.::|...|::             .::|....||     :.:|.:.|..:||.|..:
Zfish   359 --GKQAMVLFSLSVAGMNQ-------------GLLISNRQSRSHRASDAAAAAADPHEETETRSA 408

  Fly   477 S------DSSKEKPAQTFATMTPKEVSLWIDRKMRFVFPLSFIVFNALFW 520
            :      :||:||..   ....|.:... ||...|.|||.:|.|.|.::|
Zfish   409 TSRRAQKESSEEKKC---CKCKPIDADT-IDIYARAVFPFTFAVVNVIYW 454

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pHCl-2	NP_651861.1	LIC	46..522	CDD:455710	110/440 (25%)
gabrd	XP_700099.5	LIC	45..457	CDD:455710	110/440 (25%)
		LGIC_ECD	64..247	CDD:475126	45/200 (23%)