DRSC/TRiP Functional Genomics Resources

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Protein Alignment pHCl-2 and GABRQ

DIOPT Version :9

Sequence 1:NP_001303470.1 Gene:pHCl-2 / 43703 FlyBaseID:FBgn0039840 Length:526 Species:Drosophila melanogaster
Sequence 2:NP_061028.3 Gene:GABRQ / 55879 HGNCID:14454 Length:632 Species:Homo sapiens


Alignment Length:638 Identity:133/638 - (20%)
Similarity:237/638 - (37%) Gaps:202/638 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 FSVSINLSQSTVN--NCPSLKNAESMALME-LLTRLTAPCRYDRMVPPVVHNKDGEEVPMDIYAR 108
            |..|..:.:..:|  ||   ||..:.|::: :|.|:.:  |||..:.|   |..|..||:.|  .
Human    34 FEFSSAVPEVVLNLFNC---KNCANEAVVQKILDRVLS--RYDVRLRP---NFGGAPVPVRI--S 88

  Fly   109 FYIYVMKNLDSSDLQFTVQGLLQLRYLDPRLAFSSYLPNRRQPIMGESELKKMLWVPHIFLTNEQ 173
            .|:..::.:...::.:|:.......:.|.|||:.....|    :..:..:.:.||||..:..|.:
Human    89 IYVTSIEQISEMNMDYTITMFFHQTWKDSRLAYYETTLN----LTLDYRMHEKLWVPDCYFLNSK 149

  Fly   174 ASTVLGTSAKDELTSIYPNGTVLTSTRLQATLYCWMNFQKFPFDEQKCKTTLESWMYNTTLVQLH 238
            .:.|...:.::.:..::|:|||....||..|..|.::..|||.|:|.|...:||:.|....:.|.
Human   150 DAFVHDVTVENRVFQLHPDGTVRYGIRLTTTAACSLDLHKFPMDKQACNLVVESYGYTVEDIILF 214

  Fly   239 WETD-NPVSFDKQLQLTEYNLIGSLYNESIRVSNESYMSHGSLEGNYSIISFTVLLTREVGYYVI 302
            |:.: |.:...::|.:.::..:|...     .|.|.|...||    |..:.....:.|||..|::
Human   215 WDDNGNAIHMTEELHIPQFTFLGRTI-----TSKEVYFYTGS----YIRLILKFQVQREVNSYLV 270

  Fly   303 DYFLPSIMIVTISWVSFWLQADQTPARTTLGCTTLLSFITLSLSQENNLMKVSYVTMSEVWFLVC 367
            ..:.|:::....||:|||:..|.:.||.|:|.|::|...|:.....:.|..:|.:...:::.|||
Human   271 QVYWPTVLTTITSWISFWMNYDSSAARVTIGLTSMLILTTIDSHLRDKLPNISCIKAIDIYILVC 335

  Fly   368 TIFIFGSLVEFAFVNTIWRRNNDLQLKKRTTKYIVKSTFVPHLKKHR---RHGYRRT-------- 421
            ..|:|.||:|:.::|.::......:..:|            |.:..|   |:.|::.        
Human   336 LFFVFLSLLEYVYINYLFYSRGPRRQPRR------------HRRPRRVIARYRYQQVVVGNVQDG 388

  Fly   422 -----DSTMSTMSTTSMDKTCGPNN----------------------TVITIETPIIIGGSLS-- 457
                 |...|...|.:......|.:                      |.::.:.|:..|.|||  
Human   389 LINVEDGVSSLPITPAQAPLASPESLGSLTSTSEQAQLATSESLSPLTSLSGQAPLATGESLSDL 453

  Fly   458 -------------------------------------------REDS--AISLDE---------- 467
                                                       .|||  ::|.||          
Human   454 PSTSEQARHSYGVRFNGFQADDSIIPTEIRNRVEAHGHGVTHDHEDSNESLSSDERHGHGPSGKP 518

  Fly   468 ---------------------------------------------------QDETSTSESSDSSK 481
                                                               |::.|:|||.||..
Human   519 MLHHGEKGVQEAGWDLDDNNDKSDCLAIKEQFKCDTNSTWGLNDDELMAHGQEKDSSSESEDSCP 583

  Fly   482 EKPAQTFA----------TMTPKEVSLWIDRKMRFVFPLSFIVFNALFWTLVY 524
            ..|..:|.          ...||     :|:..||:|||:|.:||.::|  ||
Human   584 PSPGCSFTEGFSFDLFNPDYVPK-----VDKWSRFLFPLAFGLFNIVYW--VY 629

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pHCl-2NP_001303470.1 LIC 46..522 CDD:273305 131/634 (21%)
GABRQNP_061028.3 Neur_chan_LBD 60..>353 CDD:332142 81/312 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 410..458 7/47 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 491..523 6/31 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3644
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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