Sequence 1: | NP_001303470.1 | Gene: | pHCl-2 / 43703 | FlyBaseID: | FBgn0039840 | Length: | 526 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001097669.2 | Gene: | nAChRalpha4 / 40521 | FlyBaseID: | FBgn0266347 | Length: | 539 | Species: | Drosophila melanogaster |
Alignment Length: | 547 | Identity: | 108/547 - (19%) |
---|---|---|---|
Similarity: | 186/547 - (34%) | Gaps: | 180/547 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 85 YDRMVPPVVHNKDGEEVPMDIYARFYIYV-MKNLDSSDLQFTVQGL-LQLRYLDPRLAFSS---- 143
Fly 144 -----YLPNRRQPIMGESELKKMLWVPHIFLTNE---QASTVLGTSAKDELTSIYPNGTVLTSTR 200
Fly 201 LQATLYCWMNFQKFPFDEQKCKTTLESWMYNTTLVQL-HWET---DNPVSFDKQL----QLTEYN 257
Fly 258 LIGSLYNESIRVSNESYMSHGSLEGNYSIISFTVLLTREVGYYVIDYFLPSIMIVTISWVSFWLQ 322
Fly 323 ADQTPARTTLGCTTLLS-----FITLSLSQENNLM-----KVSYVTMSEVWFLVCT--------- 368
Fly 369 --------------IFIFGSLVEFAFVNTIWRRNNDLQLKKRTTKYIVKST---FVPHLKKHRRH 416
Fly 417 GYRRTDSTMSTMSTTSMDK--TCGPNNTV--------ITIETPIIIGGSLS-----------RED 460
Fly 461 SAISLDEQD-----------------------------------ETSTSESSDSSKEKPAQTFAT 490
Fly 491 MTPKEVSLWIDRKMRFVFPLSFIVFNA 517 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
pHCl-2 | NP_001303470.1 | LIC | 46..522 | CDD:273305 | 108/547 (20%) |
nAChRalpha4 | NP_001097669.2 | LIC | 1..505 | CDD:273305 | 108/547 (20%) |
Neur_chan_LBD | 12..227 | CDD:280998 | 54/233 (23%) | ||
Neur_chan_memb | 234..505 | CDD:280999 | 53/306 (17%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45447269 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR18945 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.030 |