DRSC/TRiP Functional Genomics Resources

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Protein Alignment pHCl-2 and CG12344

DIOPT Version :9

Sequence 1:NP_001303470.1 Gene:pHCl-2 / 43703 FlyBaseID:FBgn0039840 Length:526 Species:Drosophila melanogaster
Sequence 2:NP_001286298.1 Gene:CG12344 / 36145 FlyBaseID:FBgn0033558 Length:449 Species:Drosophila melanogaster


Alignment Length:474 Identity:127/474 - (26%)
Similarity:216/474 - (45%) Gaps:94/474 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 RLTAPCRYDRMV-PPVVHNKDGEEVPMDIYARFYIYV--MKNLDSSDLQFTVQGLLQLRYLDPRL 139
            |:..|..|.:.: ||   :|.|..|.:|    |.|:|  :.:::..|:.|.|...:..|:|:.||
  Fly    37 RVVLPPNYVKEIRPP---SKKGSPVIVD----FSIFVVDINSINVEDMDFRVDMFIHQRWLESRL 94

  Fly   140 A-----------FSSYLPNRRQPIMGESELKKMLWVPHIFLTNEQASTVLGTSAKDELTSIYPNG 193
            .           :.:.||          |:.:..|.|..:..|.:.:.:...:.|....::|.|.
  Fly    95 EIPDDIFEEGDDYVTLLP----------EVFENFWQPDPYFLNSKIAEIATLTHKFTSVTLYKNK 149

  Fly   194 TVLTSTRLQATLYCWMNFQKFPFDEQKCKTTLESWMYNTTLVQLHWETDNPVSFDKQLQLTEYNL 258
            ||..:.|:.|.:.|.|.||.:|.|.|.|...:||:..|...|:|.| :|:.|:.:.:|:|.:|||
  Fly   150 TVRYAARMHAIIACQMEFQLYPMDIQVCPIYIESFSSNNQKVKLRW-SDSGVTLNPELKLLQYNL 213

  Fly   259 IGSLYNESIRVSNESYMSHGSLEGNYSIISFTVLLTREVGYYVIDYFLPSIMIVTISWVSFWLQA 323
            ...|..|    .::.||.  ...||:|.::......|::|:::|..|.||.::|.:||.||||..
  Fly   214 GQPLELE----ESDGYMP--EKVGNFSRLTVYFRFERQIGHHLIQTFAPSSLVVMLSWFSFWLGL 272

  Fly   324 DQTPARTTLGCTTLLSFITLSLSQENNLMKVSYVTMSEVWFLVCTIFIFGSLVEFAFVNTIWRRN 388
            |..|.|.||..|.:|:.:|:....:  :..|:||...::|...|.:.:|.:|.||..|..:    
  Fly   273 DAIPGRVTLLVTCMLTLVTMFTGAD--IPPVAYVKALDLWMAGCMLSVFAALAEFVVVKVL---- 331

  Fly   389 NDLQLKKRTTKYIVKSTFVPHLKKHRRHGYRRTDSTMSTMSTTSMDKTCGPNNTVITIETPIIIG 453
             |:|.:.:..:       :|               .:..|..::|:|  |...||.:.|     |
  Fly   332 -DVQYQYQVNR-------IP---------------KVLPMRISNMEK--GQCATVASWE-----G 366

  Fly   454 GSL-SREDSAISLDEQDETS---TSESSDSSKEKPAQTFA--------TMTPKEVSLW--IDRKM 504
            |:: ||:.:      |..|:   ||...:....|||:..:        |.|..|..:|  ||:..
  Fly   367 GAVRSRKAT------QTPTTPGQTSLQGNGGPPKPARRQSLLSVAWTDTDTGVEKIMWREIDKVS 425

  Fly   505 RFVFPLSFIVFNALFWTLV 523
            |.|||:.|.||..|:|.::
  Fly   426 RAVFPILFFVFVLLYWPIL 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pHCl-2NP_001303470.1 LIC 46..522 CDD:273305 127/471 (27%)
CG12344NP_001286298.1 LIC 8..441 CDD:273305 126/469 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3644
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR18945
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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