Protein Alignment pHCl-2 and Gabra5

DIOPT Version :9

• Sequence 1: NP_001303470.1
• Gene: pHCl-2 / 43703
• FlyBaseID: FBgn0039840
• Length: 526
• Species: Drosophila melanogaster
• Sequence 2: NP_058991.2
• Gene: Gabra5 / 29707
• RGDID: 61859
• Length: 464
• Species: Rattus norvegicus
• Alignment Length: 463
• Identity: 129/463 - (27%)
• Similarity: 204/463 - (44%)
• Gaps: 102/463 - (22%)

  Fly    85 YDRMVPPVVHNKDGE---EVPMDIYARFYIYVMKNLDSSDLQFTVQGLLQLRYLDPRLAFSSYLP 146
            ||..:.|.:    ||   :|..|||...:    ..:..:::::|:....:..:.|.||.|..  |
  Rat    60 YDNRLRPGL----GERITQVRTDIYVTSF----GPVSDTEMEYTIDVFFRQSWKDERLRFKG--P 114

  Fly   147 NRRQPIMGESELKKMLWVPHIFLTNEQASTVLGTSAKDELTSIYPNGTVLTSTRLQATLYCWMNF 211
            .:|.|:  .:.|...:|.|..|..|.:.|.....:..::|..:..:||:|.:.||..:..|.|..
  Rat   115 MQRLPL--NNLLASKIWTPDTFFHNGKKSIAHNMTTPNKLLRLEDDGTLLYTMRLTISAECPMQL 177

  Fly   212 QKFPFDEQKCKTTLESWMYNTTLVQLHW---ETDNPVSFDKQLQLTEYNLIG-SLYNESIRVSNE 272
            :.||.|...|.....|:.|..:.|...|   .|.:.|..:...:|.:|:|:| ::..|:|..|.
  Rat   178 EDFPMDAHACPLKFGSYAYPNSEVVYVWTNGSTKSVVVAEDGSRLNQYHLMGQTVGTENISTST- 241

  Fly   273 SYMSHGSLEGNYSIISFTVLLTREVGYYVIDYFLPSIMIVTISWVSFWLQADQTPARTTLGCTTL 337
                     |.|:|::....|.|::||:||..:||.||.|.:|.|||||..:..||||..|.||:
  Rat   242 ---------GEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTV 297

  Fly   338 LSFITLSLSQENNLMKVSYVTMSEVWFL-VCTIFIFGSLVEFAFVN------------------T 383
            |:..|||:|..|:|.||:|.|..: ||: ||..|:|.:|:|||.||                  .
  Rat   298 LTMTTLSISARNSLPKVAYATAMD-WFIAVCYAFVFSALIEFATVNYFTKRGWAWDGKKALEAAK 361

  Fly   384 IWRRNNDLQLKKRTTKYIV-KSTFVPHLKKHRRHGYRRTDSTMSTMSTTSMDKTCGPNNTVITIE 447
            |.::..:|.|.|.|..:.. |.|..|::.|.:..|                    |..|.|
  Rat   362 IKKKERELILNKSTNAFTTGKLTHPPNIPKEQLPG--------------------GTGNAV---- 402

  Fly   448 TPIIIGGSLSREDSAISLDEQDETSTSESSDSSKEKPAQTFATMTPKEVSLWIDRKMRFVFPLSF 512
                  |:.|...|      :::||.|:.:.:|..|                ||:..|.|||:.|
  Rat   403 ------GTASIRAS------EEKTSESKKTYNSISK----------------IDKMSRIVFPILF 439

  Fly   513 IVFNALFW 520
            ..||.::|
  Rat   440 GTFNLVYW 447

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pHCl-2	NP_001303470.1	LIC	46..522	CDD:273305	129/463 (28%)
Gabra5	NP_058991.2	LIC	15..450	CDD:273305	129/463 (28%)
		LGIC_ECD_GABAAR_A5	58..256	CDD:349839	52/217 (24%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	382..414		11/67 (16%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3644
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810