Protein Alignment pHCl-2 and Gabrr1

DIOPT Version :9

• Sequence 1: NP_001303470.1
• Gene: pHCl-2 / 43703
• FlyBaseID: FBgn0039840
• Length: 526
• Species: Drosophila melanogaster
• Sequence 2: NP_058987.3
• Gene: Gabrr1 / 29694
• RGDID: 61900
• Length: 480
• Species: Rattus norvegicus
• Alignment Length: 438
• Identity: 102/438 - (23%)
• Similarity: 205/438 - (46%)
• Gaps: 67/438 - (15%)

  Fly    98 GEEVPMDIYARFYIYVMKNLDS---SDLQFTVQGLLQLRYLDPRLAFSSYLPNRRQPIMGESELK 159
            |..:|:.:..:     :::|||   .|:.||:...|:..:.|.||:|.|   .....:..:..|.
  Rat    95 GPAIPVGVDVQ-----VESLDSISEVDMDFTMTLYLRHYWKDERLSFPS---TNNLSMTFDGRLV 151

  Fly   160 KMLWVPHIFLTNEQASTVLGTSAKDELTSIYPNGTVLTSTRLQATLYCWMNFQKFPFDEQKCKTT 224
            |.:|||.:|..:.:.|.:..|:..:.:..:.|:|.||.|.|:..|..|.|:|.:||.|.|.|...
  Rat   152 KKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLE 216

  Fly   225 LESWMYNTTLVQLHWETDN-PVSFDKQLQLTEYNLIGSLYNESIRVSNESYMSHGSLEGNYSIIS 288
            :||:.|....:.|:|:..| .:..|:::.|::: ||...:       ..:.::..|..|.|:.:.
  Rat   217 IESYAYTEDDLMLYWKKGNDSLKTDERISLSQF-LIQEFH-------TTTKLAFYSSTGWYNRLY 273

  Fly   289 FTVLLTREVGYYVIDYFLPSIMIVTISWVSFWLQADQTPARTTLGCTTLLSFITLSLSQENNLMK 353
            ....|.|.:.::::..:.|:.::|.:||||||:.....|||..||.||:|:..|:......::.:
  Rat   274 INFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPR 338

  Fly   354 VSYVTMSEVWFLVCTIFIFGSLVEFAFVN--TIWRRNNDLQLKKRTTKYIVKSTFVPHLKKHRRH 416
            |||:...:::..|..:|:|.|::|:|.||  |..:...:.:|:::
  Rat   339 VSYIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQERKERKLREK-------------------- 383

  Fly   417 GYRRTDSTMSTMSTTSMDKTCG-PNNTVITIETPII------IGGSLSREDSAISLDEQDETSTS 474
                            :..||| |....:.:::...      :||.:  .::....|......|.
  Rat   384 ----------------ISCTCGLPQPRGVMLDSSYSDGEVNDLGGYM--PENGEKPDRMMVQLTL 430

  Fly   475 ESSDSSKEKPAQTFATMTPKEVSLWIDRKMRFVFPLSFIVFNALFWTL 522
            .|...|.::.:|..:.::.:..:..||:..|.:||.::|:||.::|::
  Rat   431 ASERGSPQRKSQRGSYVSMRINTHAIDKYSRIIFPAAYILFNLIYWSI 478

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pHCl-2	NP_001303470.1	LIC	46..522	CDD:273305	102/436 (23%)
Gabrr1	NP_058987.3	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	31..67
		LIC	76..479	CDD:273305	102/438 (23%)
		LGIC_ECD_GABAAR_rho	97..282	CDD:349806	51/200 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3644
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.810