DRSC/TRiP Functional Genomics Resources

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Protein Alignment pHCl-2 and GLRA2

DIOPT Version :9

Sequence 1:NP_001303470.1 Gene:pHCl-2 / 43703 FlyBaseID:FBgn0039840 Length:526 Species:Drosophila melanogaster
Sequence 2:NP_001112357.1 Gene:GLRA2 / 2742 HGNCID:4327 Length:452 Species:Homo sapiens


Alignment Length:463 Identity:131/463 - (28%)
Similarity:207/463 - (44%) Gaps:66/463 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 PSLKNAESMALMELLTRLTAPCRYDRMVPPVVHNKDGEEVPMDIYARFYIYVMKNLDSSDLQFTV 126
            ||...:.|..|.:|:.|.:.   ||..:.|   |..|.  |:::....:|....::..:.:.:.|
Human    38 PSQTLSPSDFLDKLMGRTSG---YDARIRP---NFKGP--PVNVTCNIFINSFGSVTETTMDYRV 94

  Fly   127 QGLLQLRYLDPRLAFSSYLPNRR---QPIMGESELKKMLWVPHIFLTNEQASTVLGTSAKDELTS 188
            ...|:.::.|.|||:|.| |:..   .|.|.:|     :|.|.:|..||:.:.....:..::|..
Human    95 NIFLRQQWNDSRLAYSEY-PDDSLDLDPSMLDS-----IWKPDLFFANEKGANFHDVTTDNKLLR 153

  Fly   189 IYPNGTVLTSTRLQATLYCWMNFQKFPFDEQKCKTTLESWMYNTTLVQLHWETDNPVSFDKQLQL 253
            |..||.||.|.||..||.|.|:.:.||.|.|.|...|||:.|....:...|.:|.||...:.|.|
Human   154 ISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTL 218

  Fly   254 TEYNLIGSLYNESIRVSNE-SYMSHGSLEGNYSIISFTVLLTREVGYYVIDYFLPSIMIVTISWV 317
            .::.|         :...| .|.:.....|.::.|.....|.|::|||:|..::||::||.:|||
Human   219 PQFIL---------KEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWV 274

  Fly   318 SFWLQADQTPARTTLGCTTLLSFITLSLSQENNLMKVSYVTMSEVWFLVCTIFIFGSLVEFAFVN 382
            |||:..|..|||..||.||:|:..|.|.....:|.|||||...::|..||.:|:|.:|:|:|.||
Human   275 SFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVN 339

  Fly   383 TIWRRNNDLQLKKRTTKYIVKSTFVPHLKKHRRHGYRRTDSTMSTMSTTSMDKTCGPNNTVITIE 447
            .:.|::.:....:|..|...|...|....:....|| .....:.....|::..|  |.|.:    
Human   340 FVSRQHKEFLRLRRRQKRQNKEEDVTRESRFNFSGY-GMGHCLQVKDGTAVKAT--PANPL---- 397

  Fly   448 TPIIIGGSLSREDSAISLDEQDETSTSESSDSSKEKPAQTFATMTPKEVSLWIDRKMRFVFPLSF 512
                                   ....:..|:.|:|    |.....:     ||...|..|||:|
Human   398 -----------------------PQPPKDGDAIKKK----FVDRAKR-----IDTISRAAFPLAF 430

  Fly   513 IVFNALFW 520
            ::||..:|
Human   431 LIFNIFYW 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pHCl-2NP_001303470.1 LIC 46..522 CDD:273305 131/463 (28%)
GLRA2NP_001112357.1 LIC 46..441 CDD:273305 128/455 (28%)
Strychnine-binding. /evidence=ECO:0000250|UniProtKB:O93430 236..241 1/4 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3644
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18945
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.910

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