DRSC/TRiP Functional Genomics Resources

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Protein Alignment pHCl-2 and GABRP

DIOPT Version :9

Sequence 1:NP_001303470.1 Gene:pHCl-2 / 43703 FlyBaseID:FBgn0039840 Length:526 Species:Drosophila melanogaster
Sequence 2:NP_055026.1 Gene:GABRP / 2568 HGNCID:4089 Length:440 Species:Homo sapiens


Alignment Length:491 Identity:132/491 - (26%)
Similarity:214/491 - (43%) Gaps:99/491 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 FSVSINLSQSTVNNCPSLKNAESMALMELLTRLTAPCRYDRMVPPVVHNKDGEEVPMDIYARFYI 111
            |:|.:..|...  :.|..:|            |||  .|::.:.|   |..||  |:.|.....|
Human    26 FNVEVGRSDKL--SLPGFEN------------LTA--GYNKFLRP---NFGGE--PVQIALTLDI 69

  Fly   112 YVMKNLDSSDLQFTVQGLLQLRYLDPRLAFSSYLPNRRQPIMGESELKKMLWVPHIFLTNEQAST 176
            ..:.::..|::.:|....|:.|::|.||.|..   |:...:  ::.|.:.||||..::...:.|.
Human    70 ASISSISESNMDYTATIYLRQRWMDQRLVFEG---NKSFTL--DARLVEFLWVPDTYIVESKKSF 129

  Fly   177 VLGTSAKDELTSIYPNGTVLTSTRLQATLYCWMNFQKFPFDEQKCKTTLESWMYNTTLVQLHWET 241
            :...:..:.|..::.|||||.:.|:..|:.|.|:..|:|.|.|.||..||||.|:...|:..|..
Human   130 LHEVTVGNRLIRLFSNGTVLYALRITTTVACNMDLSKYPMDTQTCKLQLESWGYDGNDVEFTWLR 194

  Fly   242 DN-PVSFDKQLQLTEYNLIGSLYNESIRVSNESYMSHGSLEGNYSIISFTVLLTREVGYYVIDYF 305
            .| .|...:.|:|.:|. |...:....|...|:        |||:.:.....|.|.|.|::::.:
Human   195 GNDSVRGLEHLRLAQYT-IERYFTLVTRSQQET--------GNYTRLVLQFELRRNVLYFILETY 250

  Fly   306 LPSIMIVTISWVSFWLQADQTPARTTLGCTTLLSFITLSLSQENNLMKVS-YVTMSEVWFLVCTI 369
            :||..:|.:||||||:..|..||||.:|.||:||..||.:....:|...: ::...:|:..:|..
Human   251 VPSTFLVVLSWVSFWISLDSVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIKAIDVYLGICFS 315

  Fly   370 FIFGSLVEFAFVNTIWRRNNDLQLKKRTTKYIVKSTFVPHLKKHRRHGYRRTDSTMSTMSTTSMD 434
            |:||:|:|:|                           |.|.            |::..|:.    
Human   316 FVFGALLEYA---------------------------VAHY------------SSLQQMAA---- 337

  Fly   435 KTCGPNNTVITIETPIIIGGSLS---REDS----AISLDEQDETS-TSESSDSSK----EKPAQT 487
            |..|....|..:....||..|:|   |:.|    .||.|..|.:. |.::||..|    ||..:.
Human   338 KDRGTTKEVEEVSITNIINSSISSFKRKISFASIEISSDNVDYSDLTMKTSDKFKFVFREKMGRI 402

  Fly   488 ---FATMTPKEVSLWIDRKMRFVFPLSFIVFNALFW 520
               |....|..|    |...:.:|||.|::.|..:|
Human   403 VDYFTIQNPSNV----DHYSKLLFPLIFMLANVFYW 434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pHCl-2NP_001303470.1 LIC 46..522 CDD:273305 132/491 (27%)
GABRPNP_055026.1 Neur_chan_LBD 43..437 CDD:332142 128/472 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4221
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.860

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