DRSC/TRiP Functional Genomics Resources

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Protein Alignment pHCl-2 and glra3

DIOPT Version :10

Sequence 1:NP_651861.1 Gene:pHCl-2 / 43703 FlyBaseID:FBgn0039840 Length:526 Species:Drosophila melanogaster
Sequence 2:XP_021333244.1 Gene:glra3 / 192124 ZFINID:ZDB-GENE-020402-1 Length:489 Species:Danio rerio


Alignment Length:495 Identity:142/495 - (28%)
Similarity:222/495 - (44%) Gaps:90/495 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 KNAESMALMELLTRLTA-PCRYDRMVPPVVHNKDGEEVPMDIYARFYIYVMKNLDSSDLQFTVQG 128
            :.|..|:..:.|.:|.. ...||..:.|   |..|.  |:::....:|....::..:.:.:.|..
Zfish    36 RRAAPMSPSDFLDKLMGRTSGYDARIRP---NFKGP--PVNVTCNIFINSFGSIAETTMDYRVNI 95

  Fly   129 LLQLRYLDPRLAFSSYLPNRR---QPIMGESELKKMLWVPHIFLTNEQASTVLGTSAKDELTSIY 190
            .|:.::.|||||:|.| |:..   .|.|.:|     :|.|.:|..||:.:.....:..::|..|:
Zfish    96 FLRQKWNDPRLAYSEY-PDDSLDLDPSMLDS-----IWKPDLFFANEKGAHFHEVTTDNKLLRIF 154

  Fly   191 PNGTVLTSTRLQATLYCWMNFQKFPFDEQKCKTTLESWMYNTTLVQLHWETDNPVSFDKQLQLTE 255
            .||.||.|.||..||.|.|:.:.||.|.|.|...|||:.|....:...|:...||.....|.|.:
Zfish   155 KNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEKGPVQVADGLTLPQ 219

  Fly   256 YNLIGSLYNES-IRVSNESYMSHGSLEGNYSIISFTVLLTREVGYYVIDYFLPSIMIVTISWVSF 319
            :    .|.:|| :|...:.|.:     |.::.|.....|.|::|||:|..::||::||.:|||||
Zfish   220 F----ILKDESDLRYCTKHYNT-----GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSF 275

  Fly   320 WLQADQTPARTTLGCTTLLSFITLSLSQENNLMKVSYVTMSEVWFLVCTIFIFGSLVEFAFVNTI 384
            |:..|..|||..||.||:|:..|.|.....:|.|||||...::|..||.:|:|.:|:|:|.||.:
Zfish   276 WINMDAAPARVALGITTVLTMTTQSSGSRTSLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFV 340

  Fly   385 WRRNNDLQLKKRTTKYIVKSTFVPHLKKHRRHGYRRTDSTMSTMSTTSMDKTCGPNNTVITIETP 449
            .|::.:|.                ..::.|:...:..|.|.......|:.:              
Zfish   341 SRQHKELL----------------RFRRRRKKSGKTFDQTFDEELAESLRR-------------- 375

  Fly   450 IIIGGSLSREDSAISLDEQDETSTSE--------------SSDSSKEKPAQTFATMTPKEVS--- 497
              |.||.|.|....|:.:.|:|:..|              ..|.:..|.|...|| ||.|.:   
Zfish   376 --INGSRSAEPVYGSMGQLDQTNDMEEEVRESRLSFTPNAGKDGAVPKTANNAAT-TPSEPAVAP 437

  Fly   498 ---------LWIDRK------MRFVFPLSFIVFNALFWTL 522
                     |:|||.      .|..|||:|:.||..:|.|
Zfish   438 GKSHEEMRKLFIDRAKKIDTVSRAGFPLAFLFFNIFYWVL 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pHCl-2NP_651861.1 LIC 46..522 CDD:455710 141/493 (29%)
glra3XP_021333244.1 LIC 13..478 CDD:273305 142/495 (29%)

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