DRSC/TRiP Functional Genomics Resources

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Protein Alignment pHCl-2 and glra3

DIOPT Version :9

Sequence 1:NP_001303470.1 Gene:pHCl-2 / 43703 FlyBaseID:FBgn0039840 Length:526 Species:Drosophila melanogaster
Sequence 2:XP_021333244.1 Gene:glra3 / 192124 ZFINID:ZDB-GENE-020402-1 Length:489 Species:Danio rerio


Alignment Length:495 Identity:142/495 - (28%)
Similarity:222/495 - (44%) Gaps:90/495 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 KNAESMALMELLTRLTA-PCRYDRMVPPVVHNKDGEEVPMDIYARFYIYVMKNLDSSDLQFTVQG 128
            :.|..|:..:.|.:|.. ...||..:.|   |..|.  |:::....:|....::..:.:.:.|..
Zfish    36 RRAAPMSPSDFLDKLMGRTSGYDARIRP---NFKGP--PVNVTCNIFINSFGSIAETTMDYRVNI 95

  Fly   129 LLQLRYLDPRLAFSSYLPNRR---QPIMGESELKKMLWVPHIFLTNEQASTVLGTSAKDELTSIY 190
            .|:.::.|||||:|.| |:..   .|.|.:|     :|.|.:|..||:.:.....:..::|..|:
Zfish    96 FLRQKWNDPRLAYSEY-PDDSLDLDPSMLDS-----IWKPDLFFANEKGAHFHEVTTDNKLLRIF 154

  Fly   191 PNGTVLTSTRLQATLYCWMNFQKFPFDEQKCKTTLESWMYNTTLVQLHWETDNPVSFDKQLQLTE 255
            .||.||.|.||..||.|.|:.:.||.|.|.|...|||:.|....:...|:...||.....|.|.:
Zfish   155 KNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEKGPVQVADGLTLPQ 219

  Fly   256 YNLIGSLYNES-IRVSNESYMSHGSLEGNYSIISFTVLLTREVGYYVIDYFLPSIMIVTISWVSF 319
            :    .|.:|| :|...:.|.:     |.::.|.....|.|::|||:|..::||::||.:|||||
Zfish   220 F----ILKDESDLRYCTKHYNT-----GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSF 275

  Fly   320 WLQADQTPARTTLGCTTLLSFITLSLSQENNLMKVSYVTMSEVWFLVCTIFIFGSLVEFAFVNTI 384
            |:..|..|||..||.||:|:..|.|.....:|.|||||...::|..||.:|:|.:|:|:|.||.:
Zfish   276 WINMDAAPARVALGITTVLTMTTQSSGSRTSLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFV 340

  Fly   385 WRRNNDLQLKKRTTKYIVKSTFVPHLKKHRRHGYRRTDSTMSTMSTTSMDKTCGPNNTVITIETP 449
            .|::.:|.                ..::.|:...:..|.|.......|:.:              
Zfish   341 SRQHKELL----------------RFRRRRKKSGKTFDQTFDEELAESLRR-------------- 375

  Fly   450 IIIGGSLSREDSAISLDEQDETSTSE--------------SSDSSKEKPAQTFATMTPKEVS--- 497
              |.||.|.|....|:.:.|:|:..|              ..|.:..|.|...|| ||.|.:   
Zfish   376 --INGSRSAEPVYGSMGQLDQTNDMEEEVRESRLSFTPNAGKDGAVPKTANNAAT-TPSEPAVAP 437

  Fly   498 ---------LWIDRK------MRFVFPLSFIVFNALFWTL 522
                     |:|||.      .|..|||:|:.||..:|.|
Zfish   438 GKSHEEMRKLFIDRAKKIDTVSRAGFPLAFLFFNIFYWVL 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pHCl-2NP_001303470.1 LIC 46..522 CDD:273305 141/493 (29%)
glra3XP_021333244.1 LIC 13..478 CDD:273305 142/495 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3644
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18945
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.910

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