DRSC/TRiP Functional Genomics Resources

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Protein Alignment pHCl-2 and lgc-57

DIOPT Version :10

Sequence 1:NP_651861.1 Gene:pHCl-2 / 43703 FlyBaseID:FBgn0039840 Length:526 Species:Drosophila melanogaster
Sequence 2:NP_496306.2 Gene:lgc-57 / 191636 WormBaseID:WBGene00001586 Length:473 Species:Caenorhabditis elegans


Alignment Length:456 Identity:108/456 - (23%)
Similarity:200/456 - (43%) Gaps:60/456 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 YDRMVPPVVHNKDGEEVPMDIYARFYIYVMKNLDSSDLQFTVQGLLQLRYLDPRLAFSSYLPNRR 149
            |:|...|::    .:::...:..:.||..|.:..:..:.|.|....|.:::|.||..:    |.:
 Worm    52 YNRNAYPLL----DQDLATHVDIQMYIEGMSSFHAQSMDFQVDIYFQEKWVDHRLQHN----NTK 108

  Fly   150 QPIMGESELKKMLWVPHIFLTNEQASTVLGTSAKDELTSIYPNGTVLTSTRLQATLYCWMNFQKF 214
            :.::.:.:|..:||.|.::..|.:.::....:..:.|..|||||||....|:..|:.|..:..::
 Worm   109 RILVKDPKLFGLLWHPDLYFANARTASFHDVTQPNFLVWIYPNGTVWYDCRISLTVLCMQDLARY 173

  Fly   215 PFDEQKCKTTLESWMYNTTLVQLHWETDNPVSFDKQLQLTEYNLIG-SLYNESIRVSNESYMSHG 278
            |.|.|.|...:.|:.|:...:.:.|...|||..::.:::.:.:|.. ..|.:..:.:...:.|  
 Worm   174 PLDSQNCGLRILSYAYDEEQLIIRWNGGNPVEVNRGIRMPDMHLKHIKFYTKRDKYATGIWSS-- 236

  Fly   279 SLEGNYSIISFTVLLTREVGYYVIDYFLPSIMIVTISWVSFWLQADQTPARTTLGCTTLLSFITL 343
                  ::..|.|  .||:.:::|..::|:.:||.|||.||||..:..|.|.:|..||||:..|.
 Worm   237 ------AVAEFHV--DREITHHIIQSYIPTSLIVIISWFSFWLDVEAVPGRVSLSITTLLTLATQ 293

  Fly   344 SLSQENNLMKVSYVTMSEVWFLVCTIFIFGSLVEFAFVNTIWRRNNDLQLKKRTTKYIVKSTFVP 408
            |.:....|.:.|.|...:||...|..|:|.:::||..||...||....::|.|.....|......
 Worm   294 SSAARMALPQASDVKAIDVWMGTCMAFVFSAMIEFTVVNYCVRRKVRTKIKPRGLSEQVHDMVAQ 358

  Fly   409 HLKKHRRHGYRRTDSTMSTMSTTSMDKTCGPNNTVITI-------------ETPIIIGGSLSRED 460
            :.:|        .|...:.....|.:....||....|:             :..:.:..||....
 Worm   359 YREK--------KDKFNNGNCEISYEMALQPNEDNATVQRNFEKKEVREMNQASLFVRRSLLPTS 415

  Fly   461 SAISLDEQDETSTSESSDSSKEKPAQTFATMTPKEVSLWIDRKMRFVFPLSFIVFNALFWTLVYC 525
            ...::  :|..:..|.:..:.:|                |||..|.:|||:||:||..:|  :|.
 Worm   416 KRKTI--EDRINRVEENRKNAQK----------------IDRYSRALFPLAFIIFNIFYW--IYY 460

  Fly   526 L 526
            |
 Worm   461 L 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pHCl-2NP_651861.1 LIC 46..522 CDD:455710 106/450 (24%)
lgc-57NP_496306.2 LIC 44..460 CDD:455710 106/453 (23%)

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