DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pHCl-2 and glc-1

DIOPT Version :10

Sequence 1:NP_651861.1 Gene:pHCl-2 / 43703 FlyBaseID:FBgn0039840 Length:526 Species:Drosophila melanogaster
Sequence 2:NP_507090.1 Gene:glc-1 / 180086 WormBaseID:WBGene00001591 Length:461 Species:Caenorhabditis elegans


Alignment Length:479 Identity:128/479 - (26%)
Similarity:206/479 - (43%) Gaps:84/479 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 NAESMALMELLTRLTAPCR---------------------YDRMVPPVVHNKDGEEVPMDIYARF 109
            |......:|.|.|||:|..                     ||..|.|...|..    |:.:....
 Worm    35 NDNGTTTLESLARLTSPIHIPIEQPQTSDSKILAHLFTSGYDFRVRPPTDNGG----PVVVSVNM 95

  Fly   110 YIYVMKNLDSSDLQFTVQGLLQLRYLDPRLAFSSYLPNRRQPIMGESELKKMLWVPHIFLTNEQA 174
            .:..:..:|..:::::.|..|:..::|.||::.  :....||......:...:|:|..|..||:.
 Worm    96 LLRTISKIDVVNMEYSAQLTLRESWIDKRLSYG--VKGDGQPDFVILTVGHQIWMPDTFFPNEKQ 158

  Fly   175 STVLGTSAKDELTSIYPNGTVLTSTRLQATLYCWMNFQKFPFDEQKCKTTLESWMYNTTLVQLHW 239
            :........:.|..|:.:||||.|.|:...|.|.|..|.:|.|.|:|...|.|:.|.|..::..|
 Worm   159 AYKHTIDKPNVLIRIHNDGTVLYSVRISLVLSCPMYLQYYPMDVQQCSIDLASYAYTTKDIEYLW 223

  Fly   240 ETDNPVSFDKQLQLTEYNLIGSLYNESIRVSNESYMSHGSLEGNYSIISFTVLLTREVGYYVIDY 304
            :..:|      ||| :..|..||.:..:..::.:|.:..:..|.||.:..|:.|.||..:|::..
 Worm   224 KEHSP------LQL-KVGLSSSLPSFQLTNTSTTYCTSVTNTGIYSCLRTTIQLKREFSFYLLQL 281

  Fly   305 FLPSIMIVTISWVSFWLQADQTPARTTLGCTTLLSFITLSLSQENNLMKVSYVTMSEVWFLVCTI 369
            ::||.|:|.:||||||......|||.|||.||||:....|....:.|..|||:...:||...|..
 Worm   282 YIPSCMLVIVSWVSFWFDRTAIPARVTLGVTTLLTMTAQSAGINSQLPPVSYIKAIDVWIGACMT 346

  Fly   370 FIFGSLVEFAFVNTIWRRNNDLQLKKRTTKYIVKSTFVPHLKKHRRHGYRRTDSTMSTMSTTSMD 434
            |||.:|:|||.||.|..:.. ::.|.||.:   :...:|.|:               .:......
 Worm   347 FIFCALLEFALVNHIANKQG-VERKARTER---EKAEIPLLQ---------------NLHNDVPT 392

  Fly   435 KTCGPNNTVITIETPIIIGGSLSRE--DSAISLDEQDETSTSESSDSSKEKPAQTFATMTPKEVS 497
            |.......|.|:        .|:|.  :|.::|.|    :.:|.:|.||.               
 Worm   393 KVFNQEEKVRTV--------PLNRRQMNSFLNLLE----TKTEWNDISKR--------------- 430

  Fly   498 LWIDRKMRFVFPLSFIVFNALFWT 521
              :|...|.:||:.|.|||.|:|:
 Worm   431 --VDLISRALFPVLFFVFNILYWS 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pHCl-2NP_651861.1 LIC 46..522 CDD:455710 128/479 (27%)
glc-1NP_507090.1 LIC 65..452 CDD:455710 120/447 (27%)

Return to query results.
Submit another query.