DRSC/TRiP Functional Genomics Resources

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Protein Alignment pHCl-2 and avr-15

DIOPT Version :10

Sequence 1:NP_651861.1 Gene:pHCl-2 / 43703 FlyBaseID:FBgn0039840 Length:526 Species:Drosophila melanogaster
Sequence 2:NP_001024076.1 Gene:avr-15 / 179834 WormBaseID:WBGene00000233 Length:657 Species:Caenorhabditis elegans


Alignment Length:474 Identity:120/474 - (25%)
Similarity:207/474 - (43%) Gaps:92/474 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 KNAESMALMELLTRLTAPCRYD-RMVPPVVHNKDG--EEVPMDIYARFYIYVMKNLDSSDLQFTV 126
            :.:::..|..||||     .|| |:.||   .:||  ...|:.:.....:..:..:|:.:::::|
 Worm   248 QTSDTEILEHLLTR-----GYDHRVRPP---GEDGTIHGGPVVVSVNMLLRSISKIDNVNMEYSV 304

  Fly   127 QGLLQLRYLDPRLAFSSYLPNRRQPIMGESE-------LKKMLWVPHIFLTNEQASTVLGTSAKD 184
            |...:..::|.||:|.         :.|:::       ..:.:|:|..|..||:.:........:
 Worm   305 QLTFRESWVDKRLSFG---------VKGDAQPDFLILTAGQEIWMPDSFFQNEKQAYKHMIDKPN 360

  Fly   185 ELTSIYPNGTVLTSTRLQATLYCWMNFQKFPFDEQKCKTTLESWMYNTTLVQLHWETDNPVSFDK 249
            .|..::.:||:|.|.|:...|.|.|:.|.:|.|.|:|...|.|:.|.|..::..|:.:.||    
 Worm   361 VLIRVHKDGTILYSVRISLVLSCPMHLQYYPMDVQQCFIDLASYAYTTKDIEYVWKEETPV---- 421

  Fly   250 QLQLTEYNLIGSLYNESIRVSNESYMSHGSLEGNYSIISFTVLLTREVGYYVIDYFLPSIMIVTI 314
            ||:.   .|..||.:..:..::.:|.:..:..|:||.:...:.|.|:..||::..::||.|:|.:
 Worm   422 QLKA---GLSSSLPSFQLTNTSTTYCTSKTNTGSYSCLRTIIQLRRQFSYYLLQLYIPSCMLVIV 483

  Fly   315 SWVSFWLQADQTPARTTLGCTTLLSFITLSLSQENNLMKVSYVTMSEVWFLVCTIFIFGSLVEFA 379
            ||||||:.....|||.|||.||||:..|.|......|..|:|:...:||...|..|||.:|:|||
 Worm   484 SWVSFWIDRTAVPARVTLGVTTLLTMTTQSSGINAKLPPVAYIKAIDVWIGACMTFIFCALLEFA 548

  Fly   380 FVNTIWRRNNDLQLKKRTTKYIVKSTFVPHLKKHRRHGYRRTDSTMSTMSTTSMDKTCGPNNTVI 444
            :|..| ....|...:.||.:   :...:|.|:...                         |:..:
 Worm   549 WVTYI-ANKQDANKRARTER---EKAELPFLQNSH-------------------------NDVWV 584

  Fly   445 TIETPIIIGGSLSREDSAISLDEQDETST-------SESSDSSKEKPAQTFATMTPKEVSLWIDR 502
            ..|.     ....||...:.::.:...|.       :|.:|.||.                 .|.
 Worm   585 PREV-----AEQEREVMTVRMNRRQTNSVWKWIKTKTEWNDKSKR-----------------ADL 627

  Fly   503 KMRFVFPLSFIVFNALFWT 521
            ..|.:||:.|:.||..:||
 Worm   628 ISRVMFPVLFLTFNISYWT 646

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pHCl-2NP_651861.1 LIC 46..522 CDD:455710 120/474 (25%)
avr-15NP_001024076.1 LIC 253..648 CDD:455710 120/469 (26%)

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