DRSC/TRiP Functional Genomics Resources

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Protein Alignment pHCl-2 and avr-15

DIOPT Version :9

Sequence 1:NP_001303470.1 Gene:pHCl-2 / 43703 FlyBaseID:FBgn0039840 Length:526 Species:Drosophila melanogaster
Sequence 2:NP_001024076.1 Gene:avr-15 / 179834 WormBaseID:WBGene00000233 Length:657 Species:Caenorhabditis elegans


Alignment Length:474 Identity:120/474 - (25%)
Similarity:207/474 - (43%) Gaps:92/474 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 KNAESMALMELLTRLTAPCRYD-RMVPPVVHNKDG--EEVPMDIYARFYIYVMKNLDSSDLQFTV 126
            :.:::..|..||||     .|| |:.||   .:||  ...|:.:.....:..:..:|:.:::::|
 Worm   248 QTSDTEILEHLLTR-----GYDHRVRPP---GEDGTIHGGPVVVSVNMLLRSISKIDNVNMEYSV 304

  Fly   127 QGLLQLRYLDPRLAFSSYLPNRRQPIMGESE-------LKKMLWVPHIFLTNEQASTVLGTSAKD 184
            |...:..::|.||:|.         :.|:::       ..:.:|:|..|..||:.:........:
 Worm   305 QLTFRESWVDKRLSFG---------VKGDAQPDFLILTAGQEIWMPDSFFQNEKQAYKHMIDKPN 360

  Fly   185 ELTSIYPNGTVLTSTRLQATLYCWMNFQKFPFDEQKCKTTLESWMYNTTLVQLHWETDNPVSFDK 249
            .|..::.:||:|.|.|:...|.|.|:.|.:|.|.|:|...|.|:.|.|..::..|:.:.||    
 Worm   361 VLIRVHKDGTILYSVRISLVLSCPMHLQYYPMDVQQCFIDLASYAYTTKDIEYVWKEETPV---- 421

  Fly   250 QLQLTEYNLIGSLYNESIRVSNESYMSHGSLEGNYSIISFTVLLTREVGYYVIDYFLPSIMIVTI 314
            ||:.   .|..||.:..:..::.:|.:..:..|:||.:...:.|.|:..||::..::||.|:|.:
 Worm   422 QLKA---GLSSSLPSFQLTNTSTTYCTSKTNTGSYSCLRTIIQLRRQFSYYLLQLYIPSCMLVIV 483

  Fly   315 SWVSFWLQADQTPARTTLGCTTLLSFITLSLSQENNLMKVSYVTMSEVWFLVCTIFIFGSLVEFA 379
            ||||||:.....|||.|||.||||:..|.|......|..|:|:...:||...|..|||.:|:|||
 Worm   484 SWVSFWIDRTAVPARVTLGVTTLLTMTTQSSGINAKLPPVAYIKAIDVWIGACMTFIFCALLEFA 548

  Fly   380 FVNTIWRRNNDLQLKKRTTKYIVKSTFVPHLKKHRRHGYRRTDSTMSTMSTTSMDKTCGPNNTVI 444
            :|..| ....|...:.||.:   :...:|.|:...                         |:..:
 Worm   549 WVTYI-ANKQDANKRARTER---EKAELPFLQNSH-------------------------NDVWV 584

  Fly   445 TIETPIIIGGSLSREDSAISLDEQDETST-------SESSDSSKEKPAQTFATMTPKEVSLWIDR 502
            ..|.     ....||...:.::.:...|.       :|.:|.||.                 .|.
 Worm   585 PREV-----AEQEREVMTVRMNRRQTNSVWKWIKTKTEWNDKSKR-----------------ADL 627

  Fly   503 KMRFVFPLSFIVFNALFWT 521
            ..|.:||:.|:.||..:||
 Worm   628 ISRVMFPVLFLTFNISYWT 646

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pHCl-2NP_001303470.1 LIC 46..522 CDD:273305 120/474 (25%)
avr-15NP_001024076.1 LIC 253..648 CDD:273305 120/469 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18945
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

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