DRSC/TRiP Functional Genomics Resources

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Protein Alignment pHCl-2 and glc-3

DIOPT Version :9

Sequence 1:NP_001303470.1 Gene:pHCl-2 / 43703 FlyBaseID:FBgn0039840 Length:526 Species:Drosophila melanogaster
Sequence 2:NP_504441.1 Gene:glc-3 / 178930 WormBaseID:WBGene00001593 Length:484 Species:Caenorhabditis elegans


Alignment Length:488 Identity:125/488 - (25%)
Similarity:210/488 - (43%) Gaps:67/488 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 NAESMALMELLTRLTAPCRYD-RMVPPVVH-NKDGEEVPMDIYARFYIYVMKNLDSSDLQFTVQG 128
            |.::.:..|::.:|... .|| |:.||.:: ...|....:.:|....|..:..:|..:::::||.
 Worm    21 NCDASSDTEIIKKLLGK-GYDWRVRPPGINLTIPGTHGAVIVYVNMLIRSISKIDDVNMEYSVQL 84

  Fly   129 LLQLRYLDPRLAFSSYLPNRRQPIMGESELKKMLWVPHIFLTNEQASTVLGTSAKDELTSIYPNG 193
            ..:..::|.|||:.  .|....|........:.:|:|..|..||:.:........:.|..|:.:|
 Worm    85 TFREEWVDGRLAYG--FPGDSTPDFLILTAGQQIWMPDSFFQNEKQAHKHDIDKPNVLIRIHRDG 147

  Fly   194 TVLTSTRLQATLYCWMNFQKFPFDEQKCKTTLESWMYNTTLVQLHWETDNPVSFDKQLQLTEYNL 258
            .:|.|.|:...|.|.|:.|.:|.|.|.|...|.|:.|....::..|:..:||...|.|.      
 Worm   148 RILYSVRISMVLSCPMHLQYYPMDVQTCLIDLASYAYTENDIEYRWKKTDPVQLKKGLH------ 206

  Fly   259 IGSLYNESIRVSNESYMSHGSLEGNYSIISFTVLLTREVGYYVIDYFLPSIMIVTISWVSFWLQA 323
             .||.:..:...:.:..:..:..|.||.:...:.|.|:..||::..::||.|:|.:|||||||..
 Worm   207 -SSLPSFELNNVDTTLCTSKTNTGTYSCLRTVLELRRQFSYYLLQLYIPSTMLVIVSWVSFWLDR 270

  Fly   324 DQTPARTTLGCTTLLSFITLSLSQENNLMKVSYVTMSEVWFLVCTIFIFGSLVEFAFVNTI---- 384
            ...|||.|||.||||:..|.:......|..|||....:||...|..||||:|:|||:|..|    
 Worm   271 GAVPARVTLGVTTLLTMTTQASGINAKLPPVSYTKAIDVWIGACLTFIFGALLEFAWVTYISSRS 335

  Fly   385 -WRRN------NDLQLKKRTTKYIVKSTFVPHLKKHRRH---GYRRTDSTMSTMSTTSMDKTCGP 439
             ::||      |.|.::.:.. .|:.:|.|....:|...   |..:........|        |.
 Worm   336 FYKRNKNCSSRNSLLIETKQA-LIIPNTVVAQFPEHPEEVEMGLAQAPDVWIRQS--------GN 391

  Fly   440 NNTVITIETPIIIGGSLSREDSAISLDEQDETSTSESSDSSKEKPAQTFATMTP-KEVSL--WID 501
            ..||..      :.|.::..:     ||..|....::...::.     |...|. :.:.|  ||.
 Worm   392 GKTVSR------VNGHINHNN-----DEAAELIIFDAKHKNRR-----FVWWTNFRNIRLIRWIR 440

  Fly   502 RKM-------------RFVFPLSFIVFNALFWT 521
            .::             |.:||..|:.||.::||
 Worm   441 NRLNVDDNAKRADLISRVLFPTLFVCFNFVYWT 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pHCl-2NP_001303470.1 LIC 46..522 CDD:273305 125/488 (26%)
glc-3NP_504441.1 LIC 29..475 CDD:273305 124/480 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3644
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18945
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

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