DRSC/TRiP Functional Genomics Resources

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Protein Alignment pHCl-2 and gab-1

DIOPT Version :10

Sequence 1:NP_651861.1 Gene:pHCl-2 / 43703 FlyBaseID:FBgn0039840 Length:526 Species:Drosophila melanogaster
Sequence 2:NP_499661.2 Gene:gab-1 / 176691 WormBaseID:WBGene00001512 Length:550 Species:Caenorhabditis elegans


Alignment Length:555 Identity:149/555 - (26%)
Similarity:243/555 - (43%) Gaps:103/555 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 NGSVVVSPLN--TTDAFSVS-INLSQSTVNNCPSLKNAESMALMELLTRLTAPCRYDRMVPPVVH 94
            ||:   .|.|  |:|..|.| .|.||:..:|..||       |.:||      ..||..:.| ..
 Worm    26 NGT---KPHNNSTSDQMSSSWSNRSQTMYSNASSL-------LSDLL------LDYDIRLRP-GF 73

  Fly    95 NKDGEEVPMDIYARFYIYVMKNLDS---SDLQFTVQGLLQLRYLDPRLAFSSYLPNRRQPIMGES 156
            ..|...:.|||       ::.:.||   .|:.:|:...|...:.|.||.:|:.:|.....:.|  
 Worm    74 GGDALLLTMDI-------IIASFDSISEVDMDYTLTMYLHQYWTDERLRWSNEIPIDEMTLSG-- 129

  Fly   157 ELKKMLWVPHIFLTNEQASTVLGTSAKDELTSIYPNGTVLTSTRLQATLYCWMNFQKFPFDEQKC 221
            |..:.:|||..||.|::.|.:...:.::::..|..:|.|....||.:||.|.||.:.||.|.|.|
 Worm   130 EFSQNIWVPDTFLANDKHSYLHEVTERNKMLRINVDGKVAYGMRLTSTLSCSMNLRNFPLDSQNC 194

  Fly   222 KTTLESWMYNTTLVQLHWETDNPVSFDKQLQLTEYNLIGSLYNESIRVSNESYMSHGSLEGNYSI 286
            ...:||:.|.|:.|.:.|.....|...:|..:.::.:.|....:|| ||..:        |:|..
 Worm   195 TVEIESYGYTTSEVLMKWNYPLAVHGVEQADVPQFTITGFHTEDSI-VSTAT--------GSYQR 250

  Fly   287 ISFTVLLTREVGYYVIDYFLPSIMIVTISWVSFWLQADQTPARTTLGCTTLLSFITLSLSQENNL 351
            :|....|.|.|||::...:||.::||.:||||||:..:.|.||..||.||:|:..|:|.....:|
 Worm   251 LSLVFQLRRSVGYFIFQTYLPCVLIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRQSL 315

  Fly   352 MKVSYVTMSEVWFLVCTIFIFGSLVEFAFVN-TIWRR-----------------NNDLQLKKRTT 398
            .::|||...:::.::|.:|:|.:|:|:|.|| :.|.|                 ..|.:......
 Worm   316 PRISYVKSIDIYLVMCFVFVFAALLEYAAVNYSYWGRERGKGGGGNEWPVNGANKEDRESAVNVQ 380

  Fly   399 KYIVKSTF--VPHLKKHRRHGYRRTDSTMST------MSTTSMDK---------TCGPNNTV--- 443
            |::.....  ||..:..|........||.:|      ..:||..|         .|...||:   
 Worm   381 KWVPSGLMDGVPQPQDRRVEALEEAMSTSNTAAQNNNFESTSKPKKRSSSPIPPLCRAGNTISEE 445

  Fly   444 ----------------------ITIETPIIIGGSLSREDSAISLDEQDETSTSESSDSSKEKPAQ 486
                                  :..:|..:.|.|.:|....::|...: .|..:|......:..:
 Worm   446 SESPDYPRYSTTSLKGARPHASLNHKTHHLKGRSSARAKRRMTLARMN-VSMKQSISGIGRRARK 509

  Fly   487 TFATMTPKEVSLWIDRKMRFVFPLSFIVFNALFWT 521
            ...|:..::|:| ||:..|.|||:.|||||..:|:
 Worm   510 VIPTIRVRDVNL-IDKYSRVVFPVCFIVFNLFYWS 543

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pHCl-2NP_651861.1 LIC 46..522 CDD:455710 143/540 (26%)
gab-1NP_499661.2 LIC 67..545 CDD:455710 130/498 (26%)

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