Protein Alignment pHCl-2 and avr-14

DIOPT Version :9

• Sequence 1: NP_001303470.1
• Gene: pHCl-2 / 43703
• FlyBaseID: FBgn0039840
• Length: 526
• Species: Drosophila melanogaster
• Sequence 2: NP_001020963.1
• Gene: avr-14 / 172270
• WormBaseID: WBGene00000232
• Length: 430
• Species: Caenorhabditis elegans
• Alignment Length: 489
• Identity: 123/489 - (25%)
• Similarity: 200/489 - (40%)
• Gaps: 109/489 - (22%)

  Fly    63 SLKNAESMALMELLTRLTAPCRYDRMVPPVVHNKDGEEV--PMDIYARFYIYVMKNLDSSDLQFT 125
            |::....:...|::.|:...  ||..|.|...|....:.  |:.:....|:..:..:|..:::::
 Worm    18 SIRAKRKLKEQEIIQRILKD--YDWRVRPRGMNATWPDTGGPVLVTVNIYLRSISKIDDVNMEYS 80

  Fly   126 VQGLLQLRYLDPRLAFSSYLPNRRQPIMGESEL--------------KKMLWVPHIFLTNEQAST 176
            .|...:..:.|.|||:..|..:      |::|:              .:.:|:|..|..||:.:.
 Worm    81 AQFTFREEWTDQRLAYERYEES------GDTEVPPFVVLATSENADQSQQIWMPDTFFQNEKEAR 139

  Fly   177 VLGTSAKDELTSIYPNGTVLTSTRLQATLYCWMNFQKFPFDEQKCKTTLESWMYNTTLVQLHWET 241
            .......:.|..|:.||.:|.|.||...|.|.|:.:.:|.|.|.|...|.|:.|.|..::..|:.
 Worm   140 RHLIDKPNVLIRIHKNGQILYSVRLSLVLSCPMSLEFYPLDRQNCLIDLASYAYTTQDIKYEWKE 204

  Fly   242 DNPV-----------SFDKQLQLTEYNLIGSLYNESIRVSNESYMSHGSLEGNYSIISFTVLLTR 295
            ..|:           ||:.|..:|:|  ..||.|                .|.||.....:.|.|
 Worm   205 KKPIQQKDGLRQSLPSFELQDVVTDY--CTSLTN----------------TGEYSCARVVLRLRR 251

  Fly   296 EVGYYVIDYFLPSIMIVTISWVSFWLQADQTPARTTLGCTTLLSFITLSLSQENNLMKVSYVTMS 360
            |..||:|..::|.||:|.:|||||||..|..|||.:||.||||:..|.:....:.|..|||:...
 Worm   252 EYSYYLIQLYIPCIMLVVVSWVSFWLDKDAVPARVSLGVTTLLTMTTQASGINSKLPPVSYIKAV 316

  Fly   361 EVWFLVCTIFIFGSLVEFAFVNTIWRRNNDLQLKKRTTKYIVKSTFVPHLKKHRRHGYRRTDSTM 425
            :||..||..||||:|:|:|.||                 |..:..|:...||.:
 Worm   317 DVWIGVCLAFIFGALLEYAVVN-----------------YYGRKEFLRKEKKKK----------- 353

  Fly   426 STMSTTSMDKTCGPNNTVITIETPIIIGGSLSREDSAISLDEQDETSTSESSDSSKEKPAQTFAT 490
                 |.:|....|::     ..|:.:..|..|....:.:.::.....|.:.|.|:.
 Worm   354 -----TRIDDCVCPSD-----RPPLRLDLSAYRSVKRLPIIKRISEILSTNIDISRR-------- 400

  Fly   491 MTPKEVSLWIDRKMRFVFPLSFIVFNALFWTLVY 524
                     :|...|..|||:|..| .:|:.:.|
 Worm   401 ---------VDLMSRLTFPLTFFSF-LIFYYVAY 424

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pHCl-2	NP_001303470.1	LIC	46..522	CDD:273305	122/485 (25%)
avr-14	NP_001020963.1	LIC	20..424	CDD:273305	121/485 (25%)
		Neur_chan_LBD	27..253	CDD:280998	57/251 (23%)
		Neur_chan_memb	260..>355	CDD:280999	43/127 (34%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR18945
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	3.010