Sequence 1: | NP_001303470.1 | Gene: | pHCl-2 / 43703 | FlyBaseID: | FBgn0039840 | Length: | 526 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_036012221.1 | Gene: | Gabra6 / 14399 | MGIID: | 95618 | Length: | 459 | Species: | Mus musculus |
Alignment Length: | 347 | Identity: | 101/347 - (29%) |
---|---|---|---|
Similarity: | 158/347 - (45%) | Gaps: | 51/347 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 100 EVPMDIYARFYIYVMKNLDSSDLQFTVQGLLQLRYLDPRLAFSSYLPNRRQPIMGESELKKM--- 161
Fly 162 ----LWVPHIFLTNEQASTVLGTSAKDELTSIYPNGTVLTSTRLQATLYCWMNFQKFPFDEQKCK 222
Fly 223 TTLESWMYNTTLVQLHWETDNPVSF---DKQLQLTEYNLIGSLYNESIRVSNESYMSHGSLEGNY 284
Fly 285 SIISFTVLLTREVGYYVIDYFLPSIMIVTISWVSFWLQADQTPARTTLGCTTLLSFITLSLSQEN 349
Fly 350 NLMKVSYVTMSEVWFL-VCTIFIFGSLVEFAFVN---TIWRRNNDLQLKKRTTKYIVKS------ 404
Fly 405 ------TFVPHLKKHRRHGYRR 420 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
pHCl-2 | NP_001303470.1 | LIC | 46..522 | CDD:273305 | 101/347 (29%) |
Gabra6 | XP_036012221.1 | LGIC_ECD_GABAAR_A6 | 42..239 | CDD:349840 | 48/205 (23%) |
LGIC_TM_GABAAR_alpha | 242..337 | CDD:349854 | 41/95 (43%) | ||
TM1 helix | 245..265 | CDD:349854 | 10/19 (53%) | ||
TM2 helix | 274..295 | CDD:349854 | 8/20 (40%) | ||
TM3 helix | 305..327 | CDD:349854 | 12/21 (57%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3644 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |