DRSC/TRiP Functional Genomics Resources

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Protein Alignment pHCl-2 and Lcch3

DIOPT Version :10

Sequence 1:NP_651861.1 Gene:pHCl-2 / 43703 FlyBaseID:FBgn0039840 Length:526 Species:Drosophila melanogaster
Sequence 2:XP_061518383.1 Gene:Lcch3 / 1272239 VectorBaseID:AGAMI1_002473 Length:497 Species:Anopheles gambiae


Alignment Length:543 Identity:143/543 - (26%)
Similarity:243/543 - (44%) Gaps:125/543 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 LSQSTVNNCPSLKNAESMA------LMELLTRLTAPCRYDRMVPPVVHNKDGE--EVPMDI-YAR 108
            |:...:||.....:..|||      :.:.::|:..  .||..:.|   |..||  .|.||: .|.
Mosquito    10 LNSVQLNNALRSVHQRSMAAGRLENVTQTISRILE--GYDIRLRP---NFGGEPLHVGMDLTIAS 69

  Fly   109 FYIYVMKNLDSSDLQFTVQGLLQLRYLDPRLAFSSYL---PNRRQ---PIMGE-----------S 156
            |......|:|     :|:...|...:.|.||||:::.   .|::.   .||.|           .
Mosquito    70 FDAISEVNMD-----YTITMYLNQYWKDERLAFNAFALWGDNQKDQTGEIMIEDDGANDVITLSG 129

  Fly   157 ELKKMLWVPHIFLTNEQASTVLGTSAKDELTSIYPNGTVLTSTRLQATLYCWMNFQKFPFDEQKC 221
            :..:.:|||..|..|::.|.:...:.:::|..:..:|.|....|...||.|.|:...:|.|.|.|
Mosquito   130 DFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLAGDGAVTYGMRFTTTLACMMDLHYYPLDSQNC 194

  Fly   222 KTTLESWMYNTTLVQLHWETDNPVSFDKQLQLTEYNLIGSLYNESIRVSNESYMSHGSLEGNYSI 286
            ...:||:.|..:.|.::|.: .|:...::.:|.::.:||  |..:.|....:       .|.|..
Mosquito   195 TVEIESYGYTVSDVVMYWRS-TPIRGVEEAELPQFTIIG--YETNDRKEKLA-------TGIYQR 249

  Fly   287 ISFTVLLTREVGYYVIDYFLPSIMIVTISWVSFWLQADQTPARTTLGCTTLLSFITLSLSQENNL 351
            :|.:..|.|.:||:|...:||||:||.:||||||:..:.|.||..||.||:|:..|:|....::|
Mosquito   250 LSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSL 314

  Fly   352 MKVSYVTMSEVWFLVCTIFIFGSLVEFAFVN-TIWRRNNDLQLKKRTTKYIVKSTFVPHLKKHRR 415
            .::|||...:::.::|.:|:|.:|:|:|.|| |.|    ..:.||::.|.          |:..|
Mosquito   315 PRISYVKAIDIYLVMCFVFVFAALLEYAAVNYTYW----GARAKKKSKKN----------KEAER 365

  Fly   416 HGYRRTDSTMSTMSTTSMDKTCGPNNTVITIE----TPIIIGGSLSREDSAISLDEQDETSTSES 476
            ..:.:|:.|    ||.|.|       .:|.::    :||   .||.....:.::      :|::|
Mosquito   366 KVFGKTEKT----STCSAD-------DIIELQDIRMSPI---ASLRNRHYSNTI------TTTDS 410

  Fly   477 SDSSKEKP------------------------------------AQTFATMTP--KEVSLWIDRK 503
            .||:|..|                                    |.......|  |:|:: ||:.
Mosquito   411 VDSAKFPPSFRIARSYGSSNRSGLRYRSSRGQGRPKMLHAIKRGASVIKASIPKIKDVNV-IDKY 474

  Fly   504 MRFVFPLSFIVFNALFWTLVYCL 526
            .|.:||:||..|||.:| :.|.|
Mosquito   475 SRVIFPVSFAAFNAGYW-IFYVL 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pHCl-2NP_651861.1 LIC 46..522 CDD:455710 141/537 (26%)
Lcch3XP_061518383.1 None

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