DRSC/TRiP Functional Genomics Resources

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Protein Alignment pHCl-2 and XB5799637

DIOPT Version :9

Sequence 1:NP_001303470.1 Gene:pHCl-2 / 43703 FlyBaseID:FBgn0039840 Length:526 Species:Drosophila melanogaster
Sequence 2:XP_031762346.1 Gene:XB5799637 / 100490720 XenbaseID:XB-GENE-5799638 Length:409 Species:Xenopus tropicalis


Alignment Length:452 Identity:119/452 - (26%)
Similarity:196/452 - (43%) Gaps:88/452 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 YDRMVPPVVHNKDGEEVPMDIYARFYIYVMKNLDSSDLQFTVQGLLQLRYLDPRLAFSSYLPNRR 149
            |::.:.|...|.     |:.:.....|..:..:...::.:|....|:.|:.|.||.|.|   |:.
 Frog    24 YNKYLRPFFDNG-----PVTVGMSLDIASIDTISEINMDYTATIFLRQRWTDERLCFES---NKS 80

  Fly   150 QPIMGESELKKMLWVPHIFLTNEQASTVLGTSAKDELTSIYPNGTVLTSTRLQATLYCWMNFQKF 214
            ..:.|  .|.::||||..|:.:.:.|.:...:.::.|..||||||||.:.|:..|:.|.|:..|:
 Frog    81 LSLDG--RLVELLWVPDTFIVDSKKSFLHDMTVENRLIRIYPNGTVLYALRITTTVACSMDLTKY 143

  Fly   215 PFDEQKCKTTLESWMYNTTLVQLHWETDN-PVSFDKQLQLTEYNLIGSLYNESIRVSNESYMSHG 278
            |.|:|.|.. ||||.|||..|..:|...| .|.....|:|.:|    ::.:....||...|.:  
 Frog   144 PMDKQTCTLXLESWSYNTNDVMFYWTRGNDSVRGLDALRLAQY----AVEDHYTSVSEAVYET-- 202

  Fly   279 SLEGNYSIISFTVLLTREVGYYVIDYFLPSIMIVTISWVSFWLQADQTPARTTLGCTTLLSFITL 343
               |.|..:.|...|.|.:.|::::.::|||::|.:||||||:.....|||..:|.||:|:..||
 Frog   203 ---GRYPKLVFHFDLKRNILYFILETYVPSILLVVLSWVSFWISLSSVPARICIGVTTVLTMTTL 264

  Fly   344 SLSQENNLMKVS-YVTMSEVWFLVCTIFIFGSLVEFAFVNTIWRRNNDLQLKKRTTKYIVKSTFV 407
            .:....:|...: ::...:|:..:|..||||:|:|:|..:.                |.:..   
 Frog   265 MMGARTSLPNANCFIKAIDVYLGICFSFIFGALLEYAIAHF----------------YTLHQ--- 310

  Fly   408 PHLKKHRRHGYRRTDSTMSTMSTTSMDKTCGPNNTVITIETPIIIGGSLSREDSAISLDEQDETS 472
            ||.|.             ||:.....:.....|.|:                 ||:|..:..:|.
 Frog   311 PHQKN-------------STIKKLVAEDEADMNGTI-----------------SAVSDGQSHQTE 345

  Fly   473 TSESSDSSKEK---PAQ-----------TFATMTPKEVSLWIDRKMRFVFPLSFIVFNALFW 520
            ..:...:.|:|   |..           .|....|.:    ||...|..|||||::.|..:|
 Frog   346 PPDEIGNGKKKIKSPVDPVLKRLLCVFYCFQVQNPHD----IDNYSRISFPLSFMIINVFYW 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pHCl-2NP_001303470.1 LIC 46..522 CDD:273305 119/452 (26%)
XB5799637XP_031762346.1 LIC 2..406 CDD:273305 119/452 (26%)
LGIC_ECD_GABAAR_pi 36..217 CDD:349805 58/194 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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