DRSC/TRiP Functional Genomics Resources

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Protein Alignment pHCl-2 and glra3

DIOPT Version :9

Sequence 1:NP_001303470.1 Gene:pHCl-2 / 43703 FlyBaseID:FBgn0039840 Length:526 Species:Drosophila melanogaster
Sequence 2:XP_002933371.1 Gene:glra3 / 100488938 XenbaseID:XB-GENE-1011160 Length:449 Species:Xenopus tropicalis


Alignment Length:441 Identity:122/441 - (27%)
Similarity:201/441 - (45%) Gaps:65/441 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 YDRMVPPVVHNKDGEEVPMDIYARFYIYVMKNLDSSDLQFTVQGLLQLRYLDPRLAFSSYLPNRR 149
            ||..:.|   |..|.  |:::....::....::..:.:.:.:...|:.::.|||||:|.| |:..
 Frog    57 YDARIRP---NFKGP--PVNVTCNIFVNSFGSIAETTMDYRLNIFLRQKWNDPRLAYSEY-PDDS 115

  Fly   150 ---QPIMGESELKKMLWVPHIFLTNEQASTVLGTSAKDELTSIYPNGTVLTSTRLQATLYCWMNF 211
               .|.|.:|     :|.|.:|..||:.:.....:..::|..|:.:|.||.|.||..||.|.|:.
 Frog   116 LDLDPSMLDS-----IWKPDLFFANEKGANFHEVTTDNKLLRIFKDGNVLYSIRLTLTLSCPMDL 175

  Fly   212 QKFPFDEQKCKTTLESWMYNTTLVQLHWETDNPVSFDKQLQLTEYNLIGSLYNESIRVSNESYMS 276
            :.||.|.|.|...|||:.|....:...|:.:.||.....|.|.::.|   ...:.:|...:.|.:
 Frog   176 KNFPMDVQTCIMQLESFGYTMNDLIFEWQENGPVQIADGLTLPQFVL---KEEKDLRYCTKHYNT 237

  Fly   277 HGSLEGNYSIISFTVLLTREVGYYVIDYFLPSIMIVTISWVSFWLQADQTPARTTLGCTTLLSFI 341
                 |.::.|.....|.|::|||:|..::||::||.:||||||:..|..|||..||.||:|:..
 Frog   238 -----GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 297

  Fly   342 TLSLSQENNLMKVSYVTMSEVWFLVCTIFIFGSLVEFAFVNTIWRRNNDLQLKKRTTKYIVKSTF 406
            |.|.....:|.|||||...::|..||.:|:|.:|:|:|.||.:.|::.:|...:|          
 Frog   298 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQHKELLRFRR---------- 352

  Fly   407 VPHLKKHRRHGYRRTDSTMSTMSTTSMDKTCGPNNTVITIETPIIIGGSLSREDSAISLDEQDET 471
                   :|...|..|...|..|.|:..                 :|..|..:|..    .....
 Frog   353 -------KRKKDRDDDVRESRFSFTAYG-----------------MGPCLQAKDGV----NPKGP 389

  Fly   472 STSESSDSSKEKPAQTFATMTPKEVSLWIDRKMRFVFPLSFIVFNALFWTL 522
            ..:..:..:.|:..:.|.....|     ||...|..|||:|::||..:|.:
 Frog   390 LNAPPAPKTHEEMRKVFIDRAKK-----IDTLSRACFPLAFLIFNIFYWVI 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pHCl-2NP_001303470.1 LIC 46..522 CDD:273305 122/439 (28%)
glra3XP_002933371.1 LIC 12..436 CDD:273305 122/441 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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