Protein Alignment pHCl-2 and gabrb3

DIOPT Version :9

• Sequence 1: NP_001303470.1
• Gene: pHCl-2 / 43703
• FlyBaseID: FBgn0039840
• Length: 526
• Species: Drosophila melanogaster
• Sequence 2: NP_001096164.1
• Gene: gabrb3 / 100124708
• XenbaseID: XB-GENE-6030743
• Length: 475
• Species: Xenopus tropicalis
• Alignment Length: 493
• Identity: 128/493 - (25%)
• Similarity: 237/493 - (48%)
• Gaps: 56/493 - (11%)

  Fly    49 VSINLSQSTVNNCPSLKNAESMALM-ELLTRLTAPCRYDRMVPPVVHNKDGEEVPMDIYARFYIY 112
            :|:.:..|.|.:..|:.:..:|:.: |.:.:|..  .||..:.|     |....|:.:.....|.
 Frog    13 ISVPILISMVCSTQSVNDPGNMSFVKETVDKLLK--GYDIRLRP-----DFGGSPVAVGMNIDIA 70

  Fly   113 VMKNLDSSDLQFTVQGLLQLRYLDPRLAFSSYLPNRRQPIMGESELKKMLWVPHIFLTNEQASTV 177
            .:..:...::.:|:....|..:.|.|||::....|    :..::.:...||||..:..|::.|.|
 Frog    71 SIDMVSEVNMDYTLTMYFQQYWRDKRLAYTGIPLN----LTLDNRVADQLWVPDTYFLNDKKSFV 131

  Fly   178 LGTSAKDELTSIYPNGTVLTSTRLQATLYCWMNFQKFPFDEQKCKTTLESWMYNTTLVQLHW-ET 241
            .|.:.|:.:..::|:||||...|:..|..|.|:.:::|.|||.|...:||:.|.|..::.:| ..
 Frog   132 HGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWLGG 196

  Fly   242 DNPVSFDKQLQLTEYNLIGSLYNESIRVSNESYMSHGSLEGNYSIISFTVLLTREVGYYVIDYFL 306
            ||.|:..::::|.::    |:.:..:...|..:.:     |:|..:|.:..|.|.:||:::..::
 Frog   197 DNAVTGVERIELPQF----SIMDHKLVSKNVVFAT-----GSYPRLSLSFKLKRNIGYFILQTYM 252

  Fly   307 PSIMIVTISWVSFWLQADQTPARTTLGCTTLLSFITLSLSQENNLMKVSYVTMSEVWFLVCTIFI 371
            |||:|..:||||||:..|.:.||..||.||:|:..|::......|.|:.||...:::.:.|.:|:
 Frog   253 PSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFV 317

  Fly   372 FGSLVEFAFVNTIWRRNNDLQLKKRTTKYIVKSTFVPHLKKHRRHGYRRTDSTMSTMSTTSMDKT 436
            |.:|:|:||||.|:..... |::|:..:...||.     |.|.:....|.|:..:.:.||.....
 Frog   318 FLALLEYAFVNYIFFGRGP-QMQKKLAEKSAKSN-----KDHSKFESNRVDAHGNILLTTLEIHN 376

  Fly   437 CGPNNTVITIETPIIIGGSLS-REDSAISLD----EQDETSTSESS-----DSSKEKPAQTFATM 491
            ....|.:.|         |:| ..:||.|.|    :..:.||:..|     ......|.:|....
 Frog   377 EVTGNEITT---------SVSDARNSATSFDNSGIQYRKQSTARDSLGRRTADRNHPPKKTHLRR 432

  Fly   492 TPKEVSL---------WIDRKMRFVFPLSFIVFNALFW 520
            ...::.:         .|||..|.|||::|.:||.::|
 Frog   433 RSSQLKIKIPDLTDVNAIDRWSRIVFPITFSLFNLIYW 470

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pHCl-2	NP_001303470.1	LIC	46..522	CDD:273305	128/493 (26%)
gabrb3	NP_001096164.1	LIC	11..473	CDD:273305	128/493 (26%)
		Neur_chan_LBD	41..243	CDD:280998	53/221 (24%)
		Neur_chan_memb	250..470	CDD:280999	66/234 (28%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910