DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk24 and asic1c

DIOPT Version :9

Sequence 1:NP_651860.2 Gene:ppk24 / 43702 FlyBaseID:FBgn0039839 Length:595 Species:Drosophila melanogaster
Sequence 2:XP_021325802.1 Gene:asic1c / 407670 ZFINID:ZDB-GENE-040513-3 Length:562 Species:Danio rerio


Alignment Length:568 Identity:115/568 - (20%)
Similarity:196/568 - (34%) Gaps:169/568 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 TSAEDTRKLSFAAALKDLLQNLSFHCYSKLVESGRRIQERFFWFVFHITALTVLIAFLWGTYTKE 111
            |...:.:.::.|..|:..:..|. |.:|    ..:...:|.||.:..:..|.:|..:.|      
Zfish    29 TLTHNIKDITTAFVLRTKVHGLK-HAFS----PHKSKTQRLFWLLALLVCLGLLFTWSW------ 82

  Fly   112 QEALVTTMYHP----MYPIW--KVEFPAISVCSLNRISQRAAWQYAHNLSGKDPKQRNASHFYDQ 170
             ..::..:.:|    :|.:|  .:.||||:.|:.||:                   |.:|...|.
Zfish    83 -NRILYLLSYPAVTKIYMVWSNNMTFPAITFCNQNRL-------------------RVSSLTRDD 127

  Fly   171 LKAFMYMYYDP--SDLMDIDNALRFQSF-LDRFDTAKEELF---------------FNTRNRMSA 217
            |      ||..  .|::.:::.|..||. :.:....:|.|.               .||...:..
Zfish   128 L------YYSGYWMDILHLNHTLNRQSVSMLKHSRHRERLLHLLDFSHYSPPPDQSLNTTEMIDR 186

  Fly   218 LTPNCSDMFVSCRIAGRLFDCMDK-FETTLTSHGFCCTFN--YDGRYVNKR-------------D 266
            |.....||.:.||..|.  :|..| |....|.:|.|.|||  .||..:...             |
Zfish   187 LGHQLQDMLLECRFRGE--NCTYKNFTPIYTRYGKCYTFNSGLDGNPLLTTLKGGTGNGLEIMLD 249

  Fly   267 FRQRYFGPDMGLVLTLKTDPSDNFY----KINGHNGYPDPFSGGVAERVAETGFNTLLPVRAKIF 327
            .:|..:.|..|       |..:..|    |:..|:....||...:...|| .||.|.:..:.::.
Zfish   250 IQQDEYLPVWG-------DTDETSYEAGIKVQIHSQDEPPFIDQLGFGVA-PGFQTFVSCQQQLL 306

  Fly   328 ETLPEARSMSPSVRKCLFENEMPWIFARH----------YTFSKCISACRAQSVVSLCECVPFSL 382
            ..||.                 ||...|.          |:.:.|...|..:.::..|.|....:
Zfish   307 LYLPP-----------------PWGDCRSAPMDSEYFSTYSITACRIDCETRYLLENCNCRMVHM 354

  Fly   383 PHRYIDGSEKRIYCT-LQHLACLKRYEFKWLNVITSRENVTGLEHELQDALYCPLCLASCTETRY 446
            |     |:.  ..|| .|:..|..    ..|:.:..::|.           || :|...|..|||
Zfish   355 P-----GTS--TVCTPEQYKDCAD----PALDFLVEKDND-----------YC-VCDTPCNMTRY 396

  Fly   447 SVRGAMTLGLPTPSQIKGPARSNPGPRANNSYGPASSSGSAKGPVHSSSAPAELAVVRIYFAETH 511
            ....:| :.:|:.:..|..|:     :.|.:               .......:.|:.|:|...:
Zfish   397 GKELSM-VKIPSKASAKYLAK-----KFNKT---------------EQYITDNILVLDIFFEALN 440

  Fly   512 IQYFRQIIKSAWYETFSTIGNI---CGIIAGFSLIGICELLFFLAKQL 556
            .:...|  |.| ||....:|:|   .|:..|.|::.|.|:..:|.:.|
Zfish   441 YEKIEQ--KKA-YEVAGLLGDIGGQMGLFIGASVLTILEIFDYLYEVL 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk24NP_651860.2 ASC 65..551 CDD:279230 110/543 (20%)
asic1cXP_021325802.1 ASC 34..531 CDD:322155 114/563 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170586588
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11690
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.950

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