DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk24 and asic2

DIOPT Version :9

Sequence 1:NP_651860.2 Gene:ppk24 / 43702 FlyBaseID:FBgn0039839 Length:595 Species:Drosophila melanogaster
Sequence 2:XP_005164179.1 Gene:asic2 / 407669 ZFINID:ZDB-GENE-040513-4 Length:564 Species:Danio rerio


Alignment Length:595 Identity:124/595 - (20%)
Similarity:199/595 - (33%) Gaps:156/595 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LDQKPFRLAVGRAAWWI------------PNPG-RVARYPPIRTLAPNHLPGTSAEDTRKLSFAA 59
            |..:..|.|...|.|.:            |.|| |.||....|       |||..:|..:|:.| 
Zfish    10 LGDEAVRPAALAALWALMALEGRCLRPASPTPGQRRARRRHTR-------PGTPRDDLSRLTVA- 66

  Fly    60 ALKDLLQNLSFHCYSKLVESGRRIQERFFWFVFHITALTVLIAFLWGTYTKEQEALVTTMYHP-- 122
                ||.....|....:......:..|.||.:...|.|.:|::  |.:     ..|:..:..|  
Zfish    67 ----LLSRTRLHGLRHICSPSNSLSRRAFWMIAFCTCLGLLLS--WSS-----NRLLHWLAFPTH 120

  Fly   123 --MYPIWKVE--FPAISVCSLNRISQRAAWQYAHNLSGKDPKQRNASHFYDQLKAFMYMYYDPSD 183
              ::..|..|  ||.:::|:.|.:.       .::|:..|  ...|.|:...|.|.........|
Zfish   121 TRVHTEWAKELAFPTVTICNNNPVR-------LYHLTKSD--LYFAGHWLGLLLANRTARPLVLD 176

  Fly   184 LMDIDNALRFQSFLD--------RFDTAKEELFFNTRNRMSALTPNCSDMFVSCRIAGRLFDC-M 239
            |:..|....|....|        ||:....|.       |..|.....||.::|:..|.  .| .
Zfish   177 LLQDDRRGWFSKLSDFRLFLPPRRFEGTSLEF-------MDRLGHQLEDMLLACKYRGE--PCGA 232

  Fly   240 DKFETTLTSHGFCCTFNYDGRYVNKRDFRQRYFGPDMGLVLTLKTDPSDNFYKING--------- 295
            ..|.|..|.:|.|..||........|...:...|..:.::|.::   .|.:..:.|         
Zfish   233 HNFSTVFTRYGKCYMFNAAEEGKTLRTTMKGGTGNGLEIMLDIQ---QDEYLPVWGETEETAFEA 294

  Fly   296 ------HNGYPDPFSGGVAERVAETGFNTLLPVRAKIFETLPEARSMSPSVRKCLFENEMPWIFA 354
                  |:....||...:...|| .||.|.:..:.:....||      |...:|:.......:| 
Zfish   295 GVRVQIHSQAEPPFVHELGFGVA-PGFQTFVATQEQRLTYLP------PPWGECVSRALDSGLF- 351

  Fly   355 RHYTFSKCISACRAQSVVSLCEC--------VPFSLPHRYIDGSEKRIYCTLQHLACLKRYEFKW 411
            :.|:.|.|...|..:.:|..|.|        .|:..|.:|.|       |....||.|...|   
Zfish   352 QVYSVSACRIECETRYIVENCNCRMVYMPGDSPYCTPEQYKD-------CAEPALAALSAVE--- 406

  Fly   412 LNVITSRENVTGLEHELQDALYCPLCLASCTETRYSVRGAMTLGLPTPSQIKGPARSNPGPRANN 476
                               ...| :|.:.|..|||:...:|         :|.|::::.      
Zfish   407 -------------------GTNC-ICRSPCNMTRYNKELSM---------VKIPSKTSA------ 436

  Fly   477 SYGPASSSGSAKGPVHSSSAPAELAVVRIYFAETHIQYFRQIIKSAWYETFSTIGNI---CGIIA 538
            .|.....:.|.|      .....:.|:.::|...:.:...|  |.| ||....:|:|   .|:..
Zfish   437 RYLEKKFNRSEK------YITDNILVLDVFFEALNYETIEQ--KKA-YEVAGLLGDIGGQMGLFI 492

  Fly   539 GFSLIGICEL 548
            |.|::.:.||
Zfish   493 GASILTLLEL 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk24NP_651860.2 ASC 65..551 CDD:279230 105/525 (20%)
asic2XP_005164179.1 ASC 71..538 CDD:295594 104/522 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170586581
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11690
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.950

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