DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk24 and scnn1a

DIOPT Version :9

Sequence 1:NP_651860.2 Gene:ppk24 / 43702 FlyBaseID:FBgn0039839 Length:595 Species:Drosophila melanogaster
Sequence 2:NP_001184124.1 Gene:scnn1a / 395013 XenbaseID:XB-GENE-996083 Length:633 Species:Xenopus tropicalis


Alignment Length:614 Identity:102/614 - (16%)
Similarity:182/614 - (29%) Gaps:217/614 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 LSFAAALKDLLQ----NLSFHCYSKLVESGRRIQERFFWFVFHITALTVL---IAFLWGTYTKEQ 112
            :.|.::.::|.:    |.:.|...:||.|.....:..||.|..:....::   ...|:|.|..  
 Frog    13 IEFFSSYRELFEFFCSNTTIHGAIRLVCSRSNRMKTAFWLVLFLATFGLMYWQFGLLFGQYFS-- 75

  Fly   113 EALVTTMYHPMYPIW--------KVEFPAISVCSLN---------------RISQRAAWQ-YAHN 153
                       ||:.        |:.|||::||:||               :.:||..:: |.:|
 Frog    76 -----------YPVSINLNVNSDKLPFPAVTVCTLNPYRYKAIQNDLQELDKETQRTLYELYKYN 129

  Fly   154 LSGKD---PKQRNASHFYDQLKAFMYMYYDPSDLMDIDNAL------------------------ 191
            .:|..   |..:........|...:.:....|....:..::                        
 Frog   130 STGVQGWIPTNQRVRRDRPGLPHLLELVPPGSKTHRVSRSVIEEELQVKRREWNIGFKLCNETGG 194

  Fly   192 --RFQSFLDRFDTAKEELFFNTRNRMSALTPNCSDMFVSCRIAGR-----LFDCMDKFETTLTS- 248
              .:|::....|..:|...|:..|.::.:....:       |.|.     :|.|....|:...: 
 Frog   195 DCFYQTYTSGVDAIREWYRFHYINILARVPEEAA-------IDGEQLENFIFACRFNEESCTKAN 252

  Fly   249 --------HGFCCTFNYDGRYVNKRDFRQRYFGPDM-----GLVLTLKTDPSDNF---------- 290
                    :|.|.|||      ..|..:...:...|     ||.|.|:|:..|..          
 Frog   253 YSHFHHAIYGNCYTFN------QNRSGQSNLWSSSMPGIKNGLTLILRTEQHDYIPLLSSVAGAR 311

  Fly   291 YKINGHN--GYPDPFSGGVAERVAETGFNTLLPVRAKIFETLPEARSMSPSVRKC---------- 343
            ..::||.  .:.|           ::|||....:...|.........|......|          
 Frog   312 VLVHGHKEPAFMD-----------DSGFNIPPGMETSIGMKKETVNRMGGKYSDCSEDGSDVDVK 365

  Fly   344 -LFENEMPWIFARHYTFSKCISACRAQSVVSLCEC----VPFSLPHRYIDGSEKR---------- 393
             |||:|        ||...|:.:|...::|..|.|    .|.|....:.|.::.:          
 Frog   366 NLFESE--------YTEQVCVRSCFQAAMVERCGCGYAFYPLSPGDEFCDYNKHKSWGHCYYKLI 422

  Fly   394 IYCTLQHLACLKRYEFKWLNVITSRENVTGLEHELQDALYCPLCLASCTETRYSVRGAMTLGLPT 458
            |..|...|.|..:                              |...|..:.|.:         |
 Frog   423 IEFTSNKLGCFSK------------------------------CRKPCLVSEYQL---------T 448

  Fly   459 PSQIKGPARSNPG---PRANNSYGPASSSGSAKGPVHSSSAPAELAVVRIYFAETHIQYFRQIIK 520
            ....|.|.|.:..   ...:..|.....:|.||              :.|||.|.:.:..::...
 Frog   449 AGYSKWPNRVSQDWVFHTLSRQYNLTDRNGIAK--------------LNIYFEELNYKTIQESPT 499

  Fly   521 SAWYETFSTIGNICGIIAGFSLIGICELL 549
            .......|.:|:...:..|.|::.:.|:|
 Frog   500 INMVMLLSLLGSQWSLWFGSSVLSVVEML 528

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk24NP_651860.2 ASC 65..551 CDD:279230 100/604 (17%)
scnn1aNP_001184124.1 ENaC 18..602 CDD:273304 101/609 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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