DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk24 and Asic3

DIOPT Version :9

Sequence 1:NP_651860.2 Gene:ppk24 / 43702 FlyBaseID:FBgn0039839 Length:595 Species:Drosophila melanogaster
Sequence 2:XP_038963092.1 Gene:Asic3 / 286920 RGDID:708578 Length:564 Species:Rattus norvegicus


Alignment Length:590 Identity:113/590 - (19%)
Similarity:186/590 - (31%) Gaps:208/590 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 PGTSAEDTRKLSFAAALKDLLQNLSFHCYSKLVESGRRIQERFFWFVFHITALTVLIAFLW---- 105
            |.:..|:.::.. |:.::....:.:.|....:...|.....|..|..   ..|..|.|||:    
  Rat     3 PRSGLEEAQRRQ-ASDIRVFASSCTMHGLGHIFGPGGLTLRRGLWAT---AVLLSLAAFLYQVAE 63

  Fly   106 ----------GTYTKEQEALVTTMYHPMYPIWKVEFPAISVCSLN-----RISQRAAWQYAHNLS 155
                      .|...|:|:      |      ::.|||:::|::|     |::..........|.
  Rat    64 RVRYYGEFHHKTTLDERES------H------QLTFPAVTLCNINPLRRSRLTPNDLHWAGTALL 116

  Fly   156 GKDPKQRNASHFYDQLKA---------FMYMYYDPSDLMDIDNALRFQSFLDRFDTAKEELFFNT 211
            |.||.:..|     .|:|         ||     ||...|:                 .:|:...
  Rat   117 GLDPAEHAA-----YLRALGQPPAPPGFM-----PSPTFDM-----------------AQLYARA 154

  Fly   212 RNRMSALTPNCSDMFVSCRIAGRLFDC-MDKFETTLTSHGFCCTFNYDGRYVNKRDFRQRYFGPD 275
            .:.:       .||.:.||..|:  .| .:.|....|..|.|.||| .|.:           |.:
  Rat   155 GHSL-------EDMLLDCRYRGQ--PCGPENFTVIFTRMGQCYTFN-SGAH-----------GAE 198

  Fly   276 M--------GLVLTLKTDPSDNFYKINGHNGYPDPFSGGVAERV---------------AETGFN 317
            :        |..|.:..|.....|.....:....||..|:..::               |..|..
  Rat   199 LLTTPKGGAGNGLEIMLDVQQEEYLPIWKDMEETPFEVGIRVQIHSQDEPPAIDQLGFGAAPGHQ 263

  Fly   318 TLLPVRAKIFETLP------EARSMSPSVRKCLFENE----------MPWIFARHYTFSKCISAC 366
            |.:..:.:....||      ...|:.|..    |:.|          .|   :..|:...|..||
  Rat   264 TFVSCQQQQLSFLPPPWGDCNTASLDPDD----FDPEPSDPLGSPRPRP---SPPYSLIGCRLAC 321

  Fly   367 RAQSVVSLCEC--------VPFSLPHRYIDGSEKRIYCTLQHLACLKRYEFKWLNVITSRENVTG 423
            .::.|...|.|        .|...|.:|.|       |....|..:.|                 
  Rat   322 ESRYVARKCGCRMMHMPGNSPVCSPQQYKD-------CASPALDAMLR----------------- 362

  Fly   424 LEHELQDALYCPLCLASCTETRYSVRGAMTLGLPTPSQIKGPARSNPGPRANNSYGPASSSGSAK 488
                 :|...||   ..|..|||:...:|         ::.|:|             ||:...|:
  Rat   363 -----KDTCVCP---NPCATTRYAKELSM---------VRIPSR-------------ASARYLAR 397

  Fly   489 GPVHSSSAPAE-LAVVRIYFAETHIQYFRQIIKSAWYETFSTIGNI---CGIIAGFSLIGICELL 549
            ....|.|...| :.|:.|:|...:   :..:.:.|.||....:|:|   .|:..|.||:.|.|:|
  Rat   398 KYNRSESYITENVLVLDIFFEALN---YEAVEQKAAYEVSELLGDIGGQMGLFIGASLLTILEIL 459

  Fly   550 FFLAK 554
            .:|.:
  Rat   460 DYLCE 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk24NP_651860.2 ASC 65..551 CDD:279230 109/565 (19%)
Asic3XP_038963092.1 ASC 17..547 CDD:413546 110/575 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166345610
Domainoid 1 1.000 111 1.000 Domainoid score I6095
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11690
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.850

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