DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk24 and acd-5

DIOPT Version :9

Sequence 1:NP_651860.2 Gene:ppk24 / 43702 FlyBaseID:FBgn0039839 Length:595 Species:Drosophila melanogaster
Sequence 2:NP_491196.3 Gene:acd-5 / 189051 WormBaseID:WBGene00020903 Length:714 Species:Caenorhabditis elegans


Alignment Length:639 Identity:142/639 - (22%)
Similarity:219/639 - (34%) Gaps:177/639 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 PNHLPGTSAEDTRKLSFAAALK-------DLLQNLSFHCYSKL-----VESGRRIQERF------ 87
            ||..|..|     |.||.:.||       .|:.::......|:     |.|..|..|.|      
 Worm    61 PNIKPSAS-----KGSFLSELKPFSKRASQLIVDVPVAHLRKIKNTEGVSSITRESEHFSNTTTL 120

  Fly    88 ---------------FWFVFHITALTVLIAFLWGTYTKEQEALVTTMYHPMYPIWKV-------- 129
                           ||....|:::.:|:.         |...:.:||.....:.:|        
 Worm   121 HGPKRIYNGKGWSCVFWVFIWISSMIMLLT---------QVTSLISMYISKPTVSQVSFLLSEGG 176

  Fly   130 -EFPAISVCSLNRISQRAAWQYAHNLSGKDPKQRNASHFYDQLKAF------MYMYYDPSDLMDI 187
             :||.::|||.|.|.:...  .|.| |.||    .:....|.|..|      :|...|.:.|...
 Worm   177 MQFPRVTVCSFNPIKRTTV--EALN-STKD----LSDDLLDYLMMFNSDAMTLYGRADAASLHSG 234

  Fly   188 DNALRFQSFLDRFDTAKEELFFNTRNRMSALTPNCSDMFVSCRIAGRLFDCMDKFETTLTSH-GF 251
            ||.  |:.::........:.||     |.| ..:|.|||..|...||.|||. |:.|.:.|. |.
 Worm   235 DNV--FKHYVSSHPNFTADNFF-----MDA-GFSCGDMFKMCSFGGRRFDCC-KYATPIFSDLGK 290

  Fly   252 CCTFNYDGRYVNKRDFRQRYFGPDM--GLVLTLKTDPSDNFYKINGHNGYPDPFSGGVA---ERV 311
            |.|.|..|   :.:.:.:....|.:  ||.:.|.:...:.|          |..:.||.   ...
 Worm   291 CFTLNLQG---SDKSWMKMQTEPGIAAGLQIILDSHLEEQF----------DSETDGVTPVFSSA 342

  Fly   312 AETGFNTLLPVRAKIFETLPEARSMSP--------SVRKCLFENEMPW-----------IFARHY 357
            .|.||...:....:|.....|..::||        |..|.:..:...|           .::..|
 Worm   343 FENGFRFYIHSSEEIPFLASEGIAVSPDSVVYSALSSSKYILLSSNAWGNCSDSWPRGYDYSFPY 407

  Fly   358 TFSKCISACRAQSVVSLCECVPFSLPH--RYIDGSEKRIYCT-LQHLACLKRYEFKWLNVITSRE 419
            |.:.|.:.|:||...:||.|.|....|  |:.|       || .:...|:   :.|...|:....
 Worm   408 TSAMCSTMCKAQYFQNLCGCSPSIYNHLNRFND-------CTPYETFICM---DTKMKKVVNQSF 462

  Fly   420 NVTGLEHELQDALYCPLCLASCTETRYSVRGAMTLGLPTPSQIKGPARSNPGPRANNSYGPASSS 484
            |:        :...|..|...|....|                          .:.||||...|.
 Worm   463 NI--------EMPTCEECKVECKSQVY--------------------------HSFNSYGKGLSR 493

  Fly   485 G-----SAKGPVHSSSAP---AELAVVRIYFAETHIQYFRQIIKSAWYETFSTIGNICGIIAGFS 541
            |     :.:|...:.:.|   ....||.::|.:.....:.|....:..|..|.||...|:..|.|
 Worm   494 GALMWLTKQGKQETWTIPHMKLNFQVVNVFFRDMSYTEYIQKRGMSLTELLSDIGGNMGMFMGMS 558

  Fly   542 LIGICELLFFLAKQLWQACRAELRAELAHIHVQIRNAQVAEPEAE---RPMKLF 592
            :..|.||..||:|..|.....:.|   .:::.:.:|.::.|.|.|   ...|||
 Worm   559 VFTIIELFLFLSKIGWIGFSRKRR---DYMYSKKKNEEMHEKELEDVVTGFKLF 609

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk24NP_651860.2 ASC 65..551 CDD:279230 120/562 (21%)
acd-5NP_491196.3 ASC 114..547 CDD:279230 107/514 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11690
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.920

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