DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk24 and del-4

DIOPT Version :9

Sequence 1:NP_651860.2 Gene:ppk24 / 43702 FlyBaseID:FBgn0039839 Length:595 Species:Drosophila melanogaster
Sequence 2:NP_492230.2 Gene:del-4 / 189033 WormBaseID:WBGene00012116 Length:527 Species:Caenorhabditis elegans


Alignment Length:553 Identity:122/553 - (22%)
Similarity:194/553 - (35%) Gaps:147/553 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 RFFW----------FVFH-ITALTVLIAFLWGTYTKEQEALVTTMYHPMYPIWKVEFPAISVCSL 139
            |.||          |::. ||.||..::|...|.|..|.|..|             ||.:::|.|
 Worm    36 RAFWILVVVVSIALFIWQFITLLTNYLSFSVNTETTLQFAERT-------------FPTVTICHL 87

  Fly   140 NRISQRAAWQYAHNLSGKDPKQRNASHFYDQLKAFMYMYYDPSDLMDIDNA--------LRFQSF 196
            |      .|:.:...| .||                    |.|.|:|..|:        |.....
 Worm    88 N------PWKLSETKS-VDP--------------------DMSALIDAYNSDSSSAQFGLPASLT 125

  Fly   197 LDRFDTA-KEELFFNTR------NRMSALTPNCSDMFVSCRIAGRLFDCMDKFETTLTSHGFCCT 254
            .||...| |..|.::.|      |..:.:..:..||.|||....:..:..|..:....|:|.|..
 Worm   126 ADRQQQASKWTLMYSERLNEKQYNDAADIAYSYDDMVVSCTYNAKTCNITDFNDFYNPSYGNCLQ 190

  Fly   255 FNYDGRYVNKRDFRQRYFGPDMGLVLTLKTDPSDNFYKINGHNG------------YPDPFSGGV 307
            ||.||.|.:.|      .||..||.:.::|| .|.:......:|            |||.|.   
 Worm   191 FNTDGMYSSSR------AGPLYGLRMVMRTD-QDTYLPWTEASGVIIDIHMQDEIPYPDVFG--- 245

  Fly   308 AERVAETGFNTLLPVRAKIFETLPEARSMSPSVRKCLFENEMPWI-FARHYTFSKCISACRAQSV 371
              ..|..|..:.|.|      :..:...:|.....|..:.::... :...||...|..:|..:.:
 Worm   246 --YFAPPGTASSLGV------SYVQTTRLSKPYGSCTTKTKLKTTHYTGTYTVEACFRSCMQEKI 302

  Fly   372 VSLCECVPFSLPHRYIDGSEKRIYC-----TLQHLACLKRYEFKWLNVITSRENVTGLEHELQDA 431
            ::.|.|  :...:.:...:.:.:.|     ||.:|.|        :::|.|.::.   |.::...
 Worm   303 IASCGC--YYPAYSHASNTTQYVSCDNGVQTLSNLNC--------VDLINSADST---EFDVLTD 354

  Fly   432 LYCPLCLASCTETRYSVRGAMTLGLPTPSQIKGPARSNPGPRANNSYGPASSSGSAKGPVHSSSA 496
            ..||   ..|....|.|. ..|...|:.|.:  |...|||       ||:       ||..:|..
 Worm   355 CDCP---QPCEIDSYGVT-VSTAQWPSDSYV--PTECNPG-------GPS-------GPWDASGE 399

  Fly   497 ------PAELAVVRIYFAETHIQYFRQIIKSAWYETFSTIGNICGIIAGFSLIGICELLFFLAKQ 555
                  .|...::.||:...:.|...:.....:....|.:|...|:..|.|:|...|.|..:...
 Worm   400 SCLDWYKANTILIEIYYERMNFQVLTESPAYTFVNFISDVGGQVGLFLGMSIISAIEYLVLIFLV 464

  Fly   556 LWQAC-RAELRAELAHIHVQIRNA-----QVAE 582
            .:..| ....|||:..:.:.|:.|     ||||
 Worm   465 FFYCCTHKSRRAEIEQLEMDIKKAKDDVDQVAE 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk24NP_651860.2 ASC 65..551 CDD:279230 112/514 (22%)
del-4NP_492230.2 ASC 8..466 CDD:295594 112/520 (22%)
deg-1 14..460 CDD:273309 112/514 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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