DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk24 and del-7

DIOPT Version :9

Sequence 1:NP_651860.2 Gene:ppk24 / 43702 FlyBaseID:FBgn0039839 Length:595 Species:Drosophila melanogaster
Sequence 2:NP_501276.4 Gene:del-7 / 183498 WormBaseID:WBGene00016699 Length:614 Species:Caenorhabditis elegans


Alignment Length:614 Identity:109/614 - (17%)
Similarity:197/614 - (32%) Gaps:187/614 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 PNPGRVARYPPIRTLAPNHLPGTSAEDTRKLSFAAALKDLLQNLSFHCYSKLV-----------E 78
            |.|.......||...:.|   .|..|:..|::            .|||..|.:           .
 Worm    26 PPPENEVFISPITLASVN---TTQYEEALKIA------------QFHCNCKYLWLRELHGLSAFM 75

  Fly    79 SGRRIQERFFWFVFHITALTVLIAFLWG-----TYTKEQEALVTTMYHPMYPIWKVEFPAISVCS 138
            ....:..:.||      |:.::....|.     :..|:.....||....:.|..:::||.:..|.
 Worm    76 MSNSLMSKVFW------AIVIMACAGWSIGNTISILKQYGDEATTTLLTILPTKQLKFPTMIFCP 134

  Fly   139 LN---------------------RISQRAAWQYAHNLSGKDPKQRNASHFYDQLKAFMYMYYDPS 182
            .|                     ..:.....|||....|.|  ..|...|.:..:..:::||   
 Worm   135 RNPDFLNYYNVLEDMYNHLGYMENTTNFHILQYAMTGFGFD--NANGDTFNETYREQIHIYY--- 194

  Fly   183 DLMDIDNALRFQSFLDRFDTAKEELF---FNTRNRMSALTPNCSDMFVSCRIAGRLFDCMDKFET 244
                    |::     |.:..:.|:|   ||....      .|:|:|.:|....:.::|.|.|:.
 Worm   195 --------LKW-----RGERTQYEMFDFMFNKNGY------TCTDLFQTCYGGSQTYNCCDIFQP 240

  Fly   245 TLTS-HGFCCTFNYDGRYVNKRDFRQRYFGPDMGLVLTLKTDPSDNFYKINGHNGYPDPFSGGVA 308
            |... .|.|              ||         |:.:...:.:|...|::       .|...:.
 Worm   241 TYAMLRGRC--------------FR---------LIDSYYQNDTDEVAKLS-------IFFNNMT 275

  Fly   309 ERVAETGFNTLLPVRAKIFETLPEA------RSMSPSVRKCLFENEMPWIFARHYTFSKCISACR 367
            ..:..||             .||:.      .::...:....:.|...|...|.|..|..:    
 Worm   276 SPILNTG-------------VLPQLVLYNGDSNVEIGIYPRYYLNSNDWNRVRFYQKSMIL---- 323

  Fly   368 AQSVVSLCECVPFSLPHRYIDG-SEKRIYCTLQHLACLKRYEFKWLNVITSRENVTGLEHE---- 427
                          ||..  || |...||  .....|   :.:|||..:..:.|.|...::    
 Worm   324 --------------LPKS--DGCSTDPIY--QGKFTC---FVYKWLMQLIEQYNCTVPYYKYTLS 367

  Fly   428 -LQDALYCPLCLASCTETRYSVRGAMTLGLPTPSQIKGPARSNPGPRANNSYGPASSSGSAKGPV 491
             |:|.   |:|     |....|.....:.| |||.| |...::...|..|:...|:|..:...|.
 Worm   368 YLKDV---PIC-----EPDVIVNNFENISL-TPSTI-GYKCTSACSRIENTVTLATSIDTDPDPS 422

  Fly   492 HSSSAPAELAVVRIYFAETHIQY--FRQIIKSAWYETFSTIGNICGIIAGFSLIGICELLFFLAK 554
            :         :.||..:.|:::|  :::|..::.....|.:|...|:..|.|::...:|...:..
 Worm   423 Y---------MFRIEASFTYLEYEQYKEIRTTSTAGFISELGGQAGLFVGSSVMSFVQLFNSVFI 478

  Fly   555 QLWQACRAELRAELAHIHVQIRNAQVAEP 583
            |:::..|.....:...:.:.:.....:||
 Worm   479 QIYKILRNYCNKKGIRVRIGLYQTHPSEP 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk24NP_651860.2 ASC 65..551 CDD:279230 97/540 (18%)
del-7NP_501276.4 ASC <434..473 CDD:295594 7/38 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162271
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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