DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk24 and Asic1

DIOPT Version :9

Sequence 1:NP_651860.2 Gene:ppk24 / 43702 FlyBaseID:FBgn0039839 Length:595 Species:Drosophila melanogaster
Sequence 2:NP_001276720.1 Gene:Asic1 / 11419 MGIID:1194915 Length:559 Species:Mus musculus


Alignment Length:545 Identity:110/545 - (20%)
Similarity:173/545 - (31%) Gaps:179/545 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 KDLL---QNLSFHCYSKLVESGRRIQERFFWFVFHITALTVLIAFLWGTYTKEQEALVTTMYHPM 123
            :||:   .:.:.|..|.:...|.....:..|.|..:.||.   |||.....:       ..|:..
Mouse    61 RDLVAFANSCTLHGASHVFVEGGPGPRQALWAVAFVIALG---AFLCQVGDR-------VAYYLS 115

  Fly   124 YP---------IWKVEFPAISVCSLN--RISQRAAWQYAHNLSGKDPKQRNASHFYDQLKAFMYM 177
            ||         ..::.|||::.|:.|  |:||.:                    :.|.|.....:
Mouse   116 YPHVTLLDEVATTELVFPAVTFCNTNAVRLSQLS--------------------YPDLLYLAPML 160

  Fly   178 YYDPSDLMDIDNALRFQSFLDRFDTAKEELF----FNTRNRMSALTPNCSDMFVSCRIAGRLFDC 238
            ..|.||...:..|           ....|.|    ||.....:.......||.:.|...|.  .|
Mouse   161 GLDESDDPGVPLA-----------PPGPEAFSGEPFNLHRFYNRSCHRLEDMLLYCSYCGG--PC 212

  Fly   239 -MDKFETTLTSHGFCCTFN--YDGRYVNKR-------------DFRQRYFGPDMGLVLTLKTDPS 287
             ...|....|.:|.|.|||  .|||...|.             |.:|..:.|..|     :||.:
Mouse   213 GPHNFSVVFTRYGKCYTFNSGQDGRPRLKTMKGGTGNGLEIMLDIQQDEYLPVWG-----ETDET 272

  Fly   288 --DNFYKINGHNGYPDPFSGGVAERVAETGFNTLLPVRAKIFETLPEARSMSPSVRKCLFENEMP 350
              :...|:..|:....||...:...|| .||.|.:..:.:....||.                 |
Mouse   273 SFEAGIKVQIHSQDEPPFIDQLGFGVA-PGFQTFVSCQEQRLIYLPS-----------------P 319

  Fly   351 W----------IFARHYTFSKCISACRAQSVVSLCEC--------VPFSLPHRYIDGSEKRIYCT 397
            |          .|...|:.:.|...|..:.:|..|.|        .|:..|.:|.:.::..:...
Mouse   320 WGTCNAVTMDSDFFDSYSITACRIDCETRYLVENCNCRMVHMPGDAPYCTPEQYKECADPALDFL 384

  Fly   398 LQHLACLKRYEFKWLNVITSRENVTGLEHELQDALYCPLCLASCTETRYSVRGAMTLGLPTPSQI 462
            ::                             :|..|| :|...|..|||....:|         :
Mouse   385 VE-----------------------------KDQEYC-VCEMPCNLTRYGKELSM---------V 410

  Fly   463 KGPARSNPGPRANNSYGPASSSGSAKGPVHSSSAPAE-LAVVRIYFAETHIQYFRQIIKSAWYET 526
            |.|::             ||:...||....|.....| :.|:.|:|...:.:...|  |.| ||.
Mouse   411 KIPSK-------------ASAKYLAKKFNKSEQYIGENILVLDIFFEVLNYETIEQ--KKA-YEI 459

  Fly   527 FSTIGNI---CGIIAGFSLIGICEL 548
            ...:|:|   .|:..|.|::.:.||
Mouse   460 AGLLGDIGGQMGLFIGASILTVLEL 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk24NP_651860.2 ASC 65..551 CDD:279230 108/542 (20%)
Asic1NP_001276720.1 ASC 63..541 CDD:295594 109/543 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167842174
Domainoid 1 1.000 108 1.000 Domainoid score I6420
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11690
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.850

Return to query results.
Submit another query.