DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk24 and scnn1d

DIOPT Version :9

Sequence 1:NP_651860.2 Gene:ppk24 / 43702 FlyBaseID:FBgn0039839 Length:595 Species:Drosophila melanogaster
Sequence 2:XP_031762206.1 Gene:scnn1d / 100496702 XenbaseID:XB-GENE-991876 Length:604 Species:Xenopus tropicalis


Alignment Length:612 Identity:114/612 - (18%)
Similarity:196/612 - (32%) Gaps:183/612 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 SFAAALKDLLQNLSFHCYSKLVESGRRIQERFFWFVFHITALTVLIAFLWGTYTKEQEALVTTMY 120
            ||...||....|.:.|...:|..|.....:..||.|.:..|..::. :.:|..|.:..|..|...
 Frog    18 SFEDMLKFFCDNTTIHGTVRLNCSRENKMKTTFWLVLYFVAFAMMY-WQFGQLTDQYWAYPTNTI 81

  Fly   121 HPMYPIWKVEFPAISVCSLNRISQRAAWQYAHNLSGKDPKQRNASHFYDQL-KAFMYMYYD---- 180
            ..:....|: |||:::|:||.........|.:.|              ||| |..:|:.|:    
 Frog    82 IGLQSKGKI-FPAVTICNLNPYRFDQVNMYINQL--------------DQLAKETLYLLYEYEYE 131

  Fly   181 ----PSDLMDIDNALR------------------------------------------------- 192
                |..::|:.:.|.                                                 
 Frog   132 VPESPQQVVDLQDLLNNVTGQFNGNFILDQSIVLQKLQENGSGPALPGQKKFKVGFKLCNSSGDC 196

  Fly   193 -FQSFLDRFDTAKEELFFNTRNRMS------ALTPNCS-DMFVSCRIAGRLFDCM--DKFETTLT 247
             ::.|...||...|...|:..|.||      .:..|.| |..::|.     |:.|  |:.|....
 Frog   197 YYKWFWSGFDAVHEWYKFHYINIMSNIPAVLNIANNFSRDYILTCH-----FNEMPCDEREYVHF 256

  Fly   248 SH---GFCCTFN---YDGRYVNKRDFRQRYFGPDMGLVLTLKTDPSDNF--------YKINGHNG 298
            .|   |.|.|.|   .:..:.:.|.      |...||.:.:|||..||.        .:|..||.
 Frog   257 HHPIYGNCFTINNHWKENSWYSSRP------GKQYGLSIVVKTDLHDNMPLLSQAAGARIMIHNP 315

  Fly   299 YPDPFSGGVAERVAETGFNTLLPVRAKIFETLPEARSMSPSVRKCLFENE---MPWIFARHYTFS 360
            ...|.       |...||:........|.....||..:.....:|..:..   :..::...||..
 Frog   316 NQPPL-------VEHQGFDIRPGTENSISVKQEEAIRLGGKYSQCTSDGSDLGIKILYNTSYTMQ 373

  Fly   361 KCISACRAQSVVSLCECVPFSLP----------HRYIDGSEKRIYCTLQHLACLKRYEFKWLNVI 415
            .|:::|....::.:|.|..:..|          :::.|..    ||..|      .||       
 Frog   374 ACLNSCFQYKMIEVCGCGYYFYPLPPGMEYCNYNKHPDWG----YCFYQ------LYE------- 421

  Fly   416 TSRENVTGLEHELQDALYCPLCLASCTETRYSVRGAMTLGLPTPSQIKGPARSNPGPRANNSYGP 480
                  ..|:|.|.....||   ..|.:|.|.: .|.|...|:|                  ...
 Frog   422 ------KMLDHTLICFTQCP---KQCKQTEYHL-SAGTAKWPSP------------------VSK 458

  Fly   481 ASSSGSAKGPVHSSSAPAELAVVRIYFAETHIQYFRQIIKSAWYETFSTIGNICGIIAGFSLIGI 545
            |....|.:...:|:|..::::.:.:|:.|...:...:....:.....|::|.:.....|.|::.:
 Frog   459 AKKLLSLQERYNSTSKRSDISKINVYYEELSYRSVEETPSVSVTMLLSSMGGLWSWWFGSSVLSV 523

  Fly   546 CEL---------LFFLAKQLWQACRAE 563
            .|:         :..:....|:..||:
 Frog   524 AEIAELVLDTVAMVIIVIYQWKKQRAK 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk24NP_651860.2 ASC 65..551 CDD:279230 107/589 (18%)
scnn1dXP_031762206.1 ENaC 18..583 CDD:273304 114/612 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.