DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk24 and asic2

DIOPT Version :9

Sequence 1:NP_651860.2 Gene:ppk24 / 43702 FlyBaseID:FBgn0039839 Length:595 Species:Drosophila melanogaster
Sequence 2:XP_004918663.1 Gene:asic2 / 100492214 XenbaseID:XB-GENE-6033380 Length:541 Species:Xenopus tropicalis


Alignment Length:553 Identity:121/553 - (21%)
Similarity:191/553 - (34%) Gaps:148/553 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 TSAEDTRKLSFAAALKDLLQNLSFHCYSKLVESGRRIQERFFWFVFHITALTVLIAFLWGTYTKE 111
            |..:....||..:.....|..|.:.|..||.     .:.|.|||:...|:|...::  |.:.   
 Frog    32 TRTQHRHALSLPSLQHIKLHGLKYICSPKLA-----FRHRTFWFLAFFTSLGFFLS--WSSN--- 86

  Fly   112 QEALVTTMYHPMYPI-------WKVE--FPAISVCSLNRISQRAAWQYAHNLSGKDPKQRNASHF 167
                 ..:|...:|.       |..|  |||::.|:.|.:.       .|.||..|  ...|.::
 Frog    87 -----RLLYWLSFPSHTRVQLEWSKELAFPAVTFCNNNPVR-------FHRLSKSD--LYFAGYW 137

  Fly   168 YDQLKAFMYMYYDPSDLMDIDNALRFQSFLDRFDTAKEELFFNTRN-------RMSALTPNCSDM 225
            ...|.|........::|:..|....||...|      ..||...||       .|..|.....||
 Frog   138 LGLLFANRTARPMLAELLPEDRRKWFQKLAD------FRLFLPPRNFDGISVGFMDRLGHQLEDM 196

  Fly   226 FVSCRIAGRLFDC-MDKFETTLTSHGFCCTFN--YDGRYVNKR-------------DFRQRYFGP 274
            .:||:..|..  | ...|.|..|.:|.|..||  .|||.|...             |.:|..:.|
 Frog   197 LLSCKYRGEA--CGPHNFSTVFTRYGKCYMFNSGQDGRPVLTTVKGGAGNGLEIMLDIQQDEYLP 259

  Fly   275 DMGLVLTLKTDPSDNFY----KINGHNGYPDPFSGGVAERVAETGFNTLLPVRAKIFETLPEARS 335
            ..|       |..:..:    |:..|:....||...:...|| .||.|.:..:.:....||    
 Frog   260 IWG-------DTEETTFEAGVKVQIHSQSEPPFIQELGFGVA-PGFQTFVATQEQRLTYLP---- 312

  Fly   336 MSPSVRKCLFENEMPWIFARHYTFSKCISACRAQSVVSLCEC--------VPFSLPHRYIDGSEK 392
             || ...|.| :|:...|...|:.|.|...|..:.:|..|.|        .||..|.:|.:.:|.
 Frog   313 -SP-WGACRF-SELGSDFFPVYSISACRIDCETRYIVENCGCKMVHMPGDAPFCTPEQYKECAEP 374

  Fly   393 RIYCTLQHLACLKRYEFKWLNVITSRENVTGLEHELQDALYCPLCLASCTETRYSVRGAMTLGLP 457
            .                  |:::..:           |...| :|...|..|||:...:|     
 Frog   375 A------------------LDLLAEK-----------DGGNC-VCTIPCNVTRYNKELSM----- 404

  Fly   458 TPSQIKGPARSNPGPRANNSYGPASSSGSAKGPVHSSSAPAELAVVRIYFAETHIQYFRQIIKSA 522
                :|.|::::.      .|.....:.|.|..:.:      :.|:.::|...:.:...|  :.|
 Frog   405 ----VKIPSKTSA------KYLEKKFNKSEKYILDN------ILVLDVFFEALNYETIEQ--RKA 451

  Fly   523 WYETFSTIGNI---CGIIAGFSLIGICELLFFL 552
             ||....:|:|   .|:..|.|::.|.||..::
 Frog   452 -YEVAGLLGDIGGQMGLFIGASILTILELFDYI 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk24NP_651860.2 ASC 65..551 CDD:279230 118/532 (22%)
asic2XP_004918663.1 ASC 49..497 CDD:383197 118/536 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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