DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk24 and asic1

DIOPT Version :9

Sequence 1:NP_651860.2 Gene:ppk24 / 43702 FlyBaseID:FBgn0039839 Length:595 Species:Drosophila melanogaster
Sequence 2:XP_004912018.1 Gene:asic1 / 100489966 XenbaseID:XB-GENE-977699 Length:525 Species:Xenopus tropicalis


Alignment Length:521 Identity:116/521 - (22%)
Similarity:194/521 - (37%) Gaps:145/521 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 RFFWFVFHITALTVLIAFLWGTYTKEQEALVTTMYHPMYP-IWKVE--------FPAISVCSLN- 140
            |..|.:..:.:|::|:      |...:..:    |:..|| :.|::        |||::.|:|| 
 Frog    42 RLIWVLCFLGSLSLLL------YVCTERII----YYFEYPHVTKLDEISTPRMIFPAVTFCNLNE 96

  Fly   141 -RISQRAAWQYAHNLSGKDPKQRNASHFYDQLKAFMYMYYDPSD-------LMDI--DNALRFQS 195
             |.|:               ..:|..:...:|.:.:...|:..|       :|:|  |.| .|::
 Frog    97 FRFSR---------------VTKNDLYHAGELLSLLNNRYELPDSQLADEKVMEILQDKA-NFRN 145

  Fly   196 FLDRFDTAKEELFFNTRNRMSALTPNCSDMFVSCRIAGRLFDC-MDKFETTLTSHGFCCTFNYDG 259
            |..:        .||.|........:..:|.:||:..|.  :| :|.|....|.:|.|.||| .|
 Frog   146 FKPK--------PFNMREFYDRTGHDIREMLLSCKYRGE--ECSVDDFVPVFTRYGKCYTFN-SG 199

  Fly   260 RYVNKR------------------DFRQRYFGPDMGLVLTLKTDPS--DNFYKINGHNGYPDPFS 304
            |  |.|                  |.:|..:.|..|     :||.:  :...|:..|:....||.
 Frog   200 R--NGRSPLVTTKGGTGNGLELMLDIQQDEYLPVWG-----ETDETSFEAGIKVQIHSQDEPPFI 257

  Fly   305 GGVAERVAETGFNTLLPVRAKIFETLPEARSMSPSVRKCLFENEMPWIFARHYTFSKCISACRAQ 369
            ..:...|| .||.|.:..:.:....||      |....|. .:.|...|...|:.|.|...|..:
 Frog   258 DQLGFGVA-PGFQTFVSCQEQRLTYLP------PPWGDCK-SSAMDSEFFDTYSISACRIDCETR 314

  Fly   370 SVVSLCECVPFSLPHRYIDGSEKRIYCTLQHLACLKRYEFKWLNVITSRENVTGLEHELQDALYC 434
            .:|..|.|....:|.   |.:    |||.:   ..|......|:.:..::|.           :|
 Frog   315 YLVENCNCRMVHMPG---DAA----YCTPE---LYKECADPALDFLVEKDND-----------FC 358

  Fly   435 PLCLASCTETRYSVRGAMTLGLPTPSQIKGPARSNPGPRANNSYGPASSSGSAKGPVHSSSAPAE 499
             :|...|..|||....:|         :|.|::             ||:...||....|....||
 Frog   359 -VCETPCNMTRYGKELSM---------VKIPSK-------------ASARYLAKKYNKSEQYIAE 400

  Fly   500 -LAVVRIYFAETHIQYFRQIIKSAWYETFSTIGNI---CGIIAGFSLIGICELLFFLAKQL-WQA 559
             :.|:.|:|...:.:...|  |.| ||....:|:|   .|:..|.|::.:.||..:..:.| ::.
 Frog   401 NILVLDIFFEALNYETIEQ--KKA-YEVAGLLGDIGGQMGLFIGASILTVLELFDYAYEVLRYKL 462

  Fly   560 C 560
            |
 Frog   463 C 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk24NP_651860.2 ASC 65..551 CDD:279230 114/509 (22%)
asic1XP_004912018.1 ASC 18..507 CDD:413546 116/521 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.