DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CAH6 and zgc:153760

DIOPT Version :10

Sequence 1:NP_001097987.1 Gene:CAH6 / 43701 FlyBaseID:FBgn0039838 Length:298 Species:Drosophila melanogaster
Sequence 2:NP_001070086.1 Gene:zgc:153760 / 767680 ZFINID:ZDB-GENE-060929-528 Length:324 Species:Danio rerio


Alignment Length:290 Identity:85/290 - (29%)
Similarity:141/290 - (48%) Gaps:40/290 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 WDYET---NGQNWGGI----CSTGERQSPISLNVQKSLIVP-LPRIVFGNYDVKLRGPLTLLNNG 86
            |.|..   |..||..|    |: |..||||.:...:....| |.:.:...:|..... .::.|:|
Zfish    26 WCYNNPACNFPNWPNIAPQYCN-GSSQSPIDIVTAQVQGNPNLTQFILTGFDANTTF-TSITNSG 88

  Fly    87 HTAHVEIPETANGNKPFITGGLLKGRFVAEAFHFHWGSPSS-RGSEHSINQQRFDVEMHIVHRNE 150
            .:..|.:.|....    :.||.|.|.:|:..||.||||.|| .||||:::.:::.:|:|||:.:.
Zfish    89 TSVVVSLDEDIMS----VQGGDLPGLYVSVQFHLHWGSSSSLPGSEHTVDGKQYAMELHIVNLHS 149

  Fly   151 KY-GDIDE--AKNKKDGIAVIGVMLKIVKNPNR-----IFPGLSKVMSALPRVTKYNAKTTIPGG 207
            .| |::..  |.|....:||:|..::.....::     :|   :..:|.:|  ...|..|.|...
Zfish   150 TYNGNVSAALAANDSSALAVLGFFIEGTDEADKTNSWDVF---TSFLSNIP--NSGNTYTDIMDQ 209

  Fly   208 LSLGQMLGNVNPRDFFTYRGSLTTPLCEQSVTWTVFSQVLPVPYSSVSKFW--------KLRDSE 264
            :::..:|..||...::.|:||||||.|.:.|.||||.:.:.|..:.:::|.        |..|..
Zfish   210 ITMNSLLEGVNKTKYYRYQGSLTTPPCNEDVIWTVFKEPIKVNNNLINRFCTKVFAKTAKASDLN 274

  Fly   265 GHRLINNFRDIQPRNGRPVFYRIGKDLSGA 294
                :||||.:||.|||.|..::.:.:|.|
Zfish   275 ----VNNFRGVQPLNGRVVTSQVEQTVSSA 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH6NP_001097987.1 Carb_anhydrase 26..287 CDD:459707 83/281 (30%)
zgc:153760NP_001070086.1 alpha_CA_IV_XV_like 48..291 CDD:239391 76/256 (30%)

Return to query results.
Submit another query.