DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH6 and CAH4

DIOPT Version :10

Sequence 1:NP_001097987.1 Gene:CAH6 / 43701 FlyBaseID:FBgn0039838 Length:298 Species:Drosophila melanogaster
Sequence 2:NP_651298.1 Gene:CAH4 / 42965 FlyBaseID:FBgn0039235 Length:279 Species:Drosophila melanogaster


Alignment Length:262 Identity:94/262 - (35%)
Similarity:157/262 - (59%) Gaps:9/262 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 SH--WDYETNGQNWGGICSTGERQSPISLNVQKSLIVPLPRIVFGNYDVKLRGPLTLLNNGHTAH 90
            ||  ::|:..|::|...|  |||||||:|....::...:|::.|.||...|..||:::|||.|..
  Fly    17 SHFGFNYDKQGRDWNVKC--GERQSPIALWSCNAITCNVPKLKFLNYHKSLCDPLSVINNGLTVL 79

  Fly    91 VEIPETANGNKPFI---TGGLLKGRFVAEAFHFHWGSPSSRGSEHSINQQRFDVEMHIVHRNEKY 152
            :.||:|.:|::|.:   |.|  :..|.|:..||||||..|:||||.::...:|.|:||||:|..|
  Fly    80 MRIPKTVDGSRPSLCISTEG--QQVFEADQLHFHWGSALSKGSEHCLDGNYYDGEVHIVHKNASY 142

  Fly   153 GDIDEAKNKKDGIAVIGVMLKIVKNPNRIFPGLSKVMSALPRVTKYNAKTTIPGGLSLGQMLGNV 217
            ....||..:.:|.||:.:.::.:::||...|.::.:...:..:||.:....:...::|..:..::
  Fly   143 KSNKEAGLQPNGFAVLALFIRNLEDPNIETPAMNMICKQVSSITKLDDSCPLEDSMALQDLFASI 207

  Fly   218 NPRDFFTYRGSLTTPLCEQSVTWTVFSQVLPVPYSSVSKFWKLRDSEGHRLINNFRDIQPRNGRP 282
            :.:.:|||:||||||.|.::|.|.||...|.||......||:||||...|::|.:|::|..:.||
  Fly   208 DSQKYFTYQGSLTTPPCAEAVIWFVFPTPLDVPKELWKHFWQLRDSRDQRVLNTYRELQDGHDRP 272

  Fly   283 VF 284
            |:
  Fly   273 VY 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH6NP_001097987.1 Carb_anhydrase 26..287 CDD:459707 94/262 (36%)
CAH4NP_651298.1 alpha_CA 35..274 CDD:238200 87/240 (36%)

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