DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH6 and Ca11

DIOPT Version :10

Sequence 1:NP_001097987.1 Gene:CAH6 / 43701 FlyBaseID:FBgn0039838 Length:298 Species:Drosophila melanogaster
Sequence 2:XP_063118182.1 Gene:Ca11 / 308588 RGDID:735155 Length:339 Species:Rattus norvegicus


Alignment Length:292 Identity:79/292 - (27%)
Similarity:131/292 - (44%) Gaps:56/292 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 ESHWDYETNGQN--------WG------GICSTGERQSPISLNVQKSLIVP-LPRIVFGNYDVKL 76
            |..|.|:.|.|.        ||      .:|:.|:||||:.:.:::.|..| ||.:.......||
  Rat    32 EDWWSYKENLQGNFVPGPPFWGLVNAAWSLCAVGKRQSPVDVELKRVLYDPFLPPLRLSTGGEKL 96

  Fly    77 RGPLTLLNNGHTAHVE-IPETANGNKPFIT---GGLLKGRFVAEAFHFHWGSPSSRGSEHSINQQ 137
            ||  ||.|.|.  ||. :|    .::|.:.   |.||....::| ....:|:....||||.||.|
  Rat    97 RG--TLYNTGR--HVSFLP----ASRPVVNVSGGPLLYSHRLSE-LRLLFGARDGAGSEHQINHQ 152

  Fly   138 RFDVE-----------MHIVHRN-EKYGDIDEAKNKKDGIAVIGVMLKIVKNPNRIFPGLSKVMS 190
            .|..|           :.::|.| |.||::..|....:|:|::.:.:.:..:.|   |.||::::
  Rat   153 GFSAEEPFSVLPLPPQVQLIHFNQELYGNLSAASRGPNGLAILSLFVNVAGSSN---PFLSRLLN 214

  Fly   191 --ALPRVTKYNAKTTIPGGLSLGQMLGNVNPRD--FFTYRGSLTTPLCEQSVTWTVFSQVLPVPY 251
              .:.|:: |.........|||..:.    |..  |.||:|||:||.|.::|||.:..:.|.:..
  Rat   215 RDTITRIS-YKNDAYFLQDLSLELLF----PESFGFITYQGSLSTPPCSETVTWILIDRALNITS 274

  Fly   252 SSVSKFWKLRDSEGHRLINNFRDIQPRNGRPV 283
            ..:.....|..:...::..:...    ||||:
  Rat   275 LQMHSLRLLSQNPPSQIFQSLSG----NGRPL 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH6NP_001097987.1 Carb_anhydrase 26..287 CDD:459707 79/292 (27%)
Ca11XP_063118182.1 None

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