DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH6 and cah-3

DIOPT Version :10

Sequence 1:NP_001097987.1 Gene:CAH6 / 43701 FlyBaseID:FBgn0039838 Length:298 Species:Drosophila melanogaster
Sequence 2:NP_001370788.1 Gene:cah-3 / 181713 WormBaseID:WBGene00000281 Length:246 Species:Caenorhabditis elegans


Alignment Length:275 Identity:83/275 - (30%)
Similarity:129/275 - (46%) Gaps:54/275 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 HWDY----ETNGQNWGGICSTGERQSPISLNVQKSLIVPLPR------IVFGNYDVKLRGPLTLL 83
            ||.|    |.....|    .||:.||||::::.:     :.|      |.|.|||..::|  .::
 Worm     4 HWSYCDDDECGPNRW----PTGQHQSPINIDLGE-----VERKDTHDGIKFVNYDHPIQG--DIV 57

  Fly    84 NNGHTAHVEIPETANGNKPFITGGLLKGRFVAEAFHFHWGSPSSRGSEHSINQQRFDVEMHIVHR 148
            ||||:  |::........|.|.||.|...:....:|||||...:.||||::...|:..|:|:||:
 Worm    58 NNGHS--VQMTPELRSEHPEIYGGGLDQVYRLVQYHFHWGENDNEGSEHTLGGLRYPAELHLVHQ 120

  Fly   149 NEKYGDIDEAKNKKDGIAVIGVML------KIVKNPNRIFPGLSKVMS--ALPRVTKYNAKTTIP 205
                |..|..|     :||:||.|      |.:.|..|:   |.|:.:  .:.||........:|
 Worm   121 ----GVEDPGK-----LAVVGVFLQLGKEGKALSNEERV---LGKLCNPETVTRVENVRLSEKLP 173

  Fly   206 GGLSLGQMLGNVNPRDFFTYRGSLTTPLCEQSVTWTVFSQVLPVPYSSVSKFWKLRDSEGHRLIN 270
                       .|.|.|:.|.||||||.|.:.||||:|::.:.|.:..:..|.:::|.|...:..
 Worm   174 -----------ANKRSFWRYEGSLTTPPCSEIVTWTIFTEPVTVTHDQLELFRQVQDIEKRPIKK 227

  Fly   271 NFRDIQPRNGRPVFY 285
            |:|..|..|.|.:.:
 Worm   228 NYRPTQNLNDRKIVH 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH6NP_001097987.1 Carb_anhydrase 26..287 CDD:459707 83/275 (30%)
cah-3NP_001370788.1 Carb_anhydrase 13..240 CDD:459707 79/262 (30%)

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