DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH6 and cah-4

DIOPT Version :10

Sequence 1:NP_001097987.1 Gene:CAH6 / 43701 FlyBaseID:FBgn0039838 Length:298 Species:Drosophila melanogaster
Sequence 2:NP_510265.1 Gene:cah-4 / 181478 WormBaseID:WBGene00000282 Length:280 Species:Caenorhabditis elegans


Alignment Length:261 Identity:74/261 - (28%)
Similarity:118/261 - (45%) Gaps:38/261 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 STGERQSPISLNVQKSLIVPLPRIVFGNYDVKLRGPLTL-LNNGHTAHVEIPE---TANGNK--- 101
            :..:|||||.:         :|:.|..:.||.....|.: ..:|....|.:.|   ..|..:   
 Worm    47 AAAQRQSPIDI---------VPQHVCCDTDVCKADALNIDYKSGDCCDVLVSEGGFLVNVKRNCG 102

  Fly   102 PFITGG-LLKGRFVAEAFHFHWGSPSSRGSEHSINQQRFDVEMHIVHRNEKYGDIDEAKNKKDGI 165
            .|:|.. |...:|....||.||||.|..||||.::.::...|:|.|..|..|...:.|.:|.||:
 Worm   103 TFLTANHLPSSKFALAQFHAHWGSNSKEGSEHFLDGKQLSGEVHFVFWNTSYESFNVALSKPDGL 167

  Fly   166 AVIGVMLKIVK-NPNRIFPGLSKVMSALPRVTKYNAKTTIPGGLSLGQMLGNVNPRDFFTYRGSL 229
            ||:||.||..| |.|  :.||   :..:.:.|.......:|....:..:|.:.:.|:|.||.|||
 Worm   168 AVVGVFLKEGKYNDN--YHGL---IDTVRKATGNATPIAMPKDFHIEHLLPSPDKREFVTYLGSL 227

  Fly   230 TTPLCEQSVTWTVFSQVLPVPYSSVSKFWKLRDSEGHRLINNFRDIQPRNGRPVFYRIGKDLSGA 294
            |||...:.|.||:|::.:.|.:..               :|..|:|.|.|.|....|..:::..:
 Worm   228 TTPPYNECVIWTLFTEPVEVSFGQ---------------LNVLRNIIPANHRACQDRCDREIRSS 277

  Fly   295 Y 295
            :
 Worm   278 F 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH6NP_001097987.1 Carb_anhydrase 26..287 CDD:459707 73/251 (29%)
cah-4NP_510265.1 alpha_CA 50..275 CDD:238200 74/253 (29%)

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