DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH6 and ca4.2

DIOPT Version :10

Sequence 1:NP_001097987.1 Gene:CAH6 / 43701 FlyBaseID:FBgn0039838 Length:298 Species:Drosophila melanogaster
Sequence 2:XP_002933882.2 Gene:ca4.2 / 100489625 XenbaseID:XB-GENE-5952677 Length:302 Species:Xenopus tropicalis


Alignment Length:295 Identity:83/295 - (28%)
Similarity:133/295 - (45%) Gaps:79/295 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 ESHWDYETNGQN--------WG---GICSTGERQSPISLNVQKSLI-VPLPRIVFGNYDVKLRGP 79
            |..|.||..|..        ||   ..|:. ..||||::..:|::. ..|....|..|::..| .
 Frog    23 EGDWCYEIQGHQTLGCGPRFWGEHYPTCAK-NHQSPINVLTKKAVFDKALKPFHFKGYNITGR-H 85

  Fly    80 LTLLNNGHTAHVEIPETANGNKPFITGGLLKGRFVAEAFHFHWGSPSSRGSEHSINQQRFDVEMH 144
            |.:.||||:|.|::|....     |:||.|...::|..|||||||....||||:::.:::.:|:|
 Frog    86 LNITNNGHSAQVDLPTGIE-----ISGGGLSETYIAAQFHFHWGSDEFYGSEHTVDGEKYPMELH 145

  Fly   145 IVHRNEK----YGDIDEAKNKKDGIAVIGVMLKIVKNPNRIFPGLSKVMSALPRVTKYNAKTTIP 205
            |||:.:.    :||          :||:|...:.....|                |:||      
 Frog   146 IVHKRKTSTGGFGD----------LAVLGFFYEETAKNN----------------TEYN------ 178

  Fly   206 GGLSLGQMLGNVNPRD--------------------FFTYRGSLTTPLCEQSVTWTVFSQVLPVP 250
               ||.:.||:::.:|                    ::.|.||||||.|.::|.||:|:..:.:.
 Frog   179 ---SLIESLGHISTKDGYKNFSATLDKLIPINELKVYYRYNGSLTTPPCNETVIWTLFNTTIKLS 240

  Fly   251 YSSVSKFW-KLRDSEGHRLINNFRDIQPRNGRPVF 284
            ...:..|. .|..:|..|::.|||.:|.|:.|.|:
 Frog   241 KLQLQAFHNSLNFTEKQRMVENFRPVQKRSDRIVY 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH6NP_001097987.1 Carb_anhydrase 26..287 CDD:459707 83/295 (28%)
ca4.2XP_002933882.2 alpha_CA_IV_XV_like 52..275 CDD:239391 74/264 (28%)

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