DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1750 and arnA

DIOPT Version :10

Sequence 1:NP_651857.2 Gene:CG1750 / 43699 FlyBaseID:FBgn0039836 Length:342 Species:Drosophila melanogaster
Sequence 2:NP_416758.1 Gene:arnA / 947683 ECOCYCID:G7168 Length:660 Species:Escherichia coli


Alignment Length:135 Identity:47/135 - (34%)
Similarity:67/135 - (49%) Gaps:17/135 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 QFDLGVVVSF--GHLIPGSIINGFPYGMINVHASLLPKWRGAAPIIYAIMKGDASTGVSIMKIEP 160
            |....|:.||  .|||...|:...|.|..|:|.|||||:||.||:.:.::.|:..|||::.:: .
E. coli    73 QLSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGSLLPKYRGRAPLNWVLVNGETETGVTLHRM-V 136

  Fly   161 HRFDIGDILAQREVAINPDVFMPDLHASLASLGAELLVDTI------NNLSVRLKEAK------- 212
            .|.|.|.|:||..:||.||.....||..|.....:||..|:      |.|.:..:|.:       
E. coli   137 KRADAGAIVAQLRIAIAPDDIAITLHHKLCHAARQLLEQTLPAIKHGNILEIAQRENEATCFGRR 201

  Fly   213 -PQDS 216
             |.||
E. coli   202 TPDDS 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1750NP_651857.2 Fmt 37..325 CDD:439993 47/135 (35%)
arnANP_416758.1 PRK08125 1..660 CDD:236156 47/135 (35%)

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