DRSC/TRiP Functional Genomics Resources

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Protein Alignment qless and GGPS1

DIOPT Version :9

Sequence 1:NP_001287619.1 Gene:qless / 43697 FlyBaseID:FBgn0051005 Length:436 Species:Drosophila melanogaster
Sequence 2:NP_001032354.1 Gene:GGPS1 / 9453 HGNCID:4249 Length:300 Species:Homo sapiens


Alignment Length:336 Identity:72/336 - (21%)
Similarity:136/336 - (40%) Gaps:74/336 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 VREFQIDPYIILDDDLKYFYDDVRYLLKSGTSQPELDTIASYYFDGQGKALRPMVTMLMAKAINY 170
            |:...::||              :|||:.                 .||.:|..    :::|.|:
Human     8 VQRILLEPY--------------KYLLQL-----------------PGKQVRTK----LSQAFNH 37

  Fly   171 HLNNESHQLVHKQRQIAL-FSEMVHSASLVHDDVIDQSDFRRGKPSVNALWNHKKVTMAGDYILS 234
            .|.....:|     ||.: .:||:|:|||:.||:.|.|..|||.|..::::....|..:.:|:..
Human    38 WLKVPEDKL-----QIIIEVTEMLHNASLLIDDIEDNSKLRRGFPVAHSIYGIPSVINSANYVYF 97

  Fly   235 IASIMIARLRSDDVTIVLSQILTDLVQGEFMQLGSRE-----TENERFAHYLTKTYRKTASLIAN 294
            :....:..|...|...:.::.|.:|.||:.:.:..|:     ||.|    |.....:||..|...
Human    98 LGLEKVLTLDHPDAVKLFTRQLLELHQGQGLDIYWRDNYTCPTEEE----YKAMVLQKTGGLFGL 158

  Fly   295 ALKATAVIAQADDNVAEVAFQYGRNIGLAFQLVDDMLDFVSSTEQMGKPTAADLKLGLATAPVLF 359
            |:....:.:...:::..:.    ..:||.||:.||..:..|......|....||..|..:.|.:.
Human   159 AVGLMQLFSDYKEDLKPLL----NTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIH 219

  Fly   360 ACEKYPELNPM--VMRRFSEPGDVER----------AFELVHKSHGLEQTRFLAKKHCN------ 406
            |....||...:  ::|:.:|..|:::          :||....:  |::....|.|..:      
Human   220 AIWSRPESTQVQNILRQRTENIDIKKYCVHYLEDVGSFEYTRNT--LKELEAKAYKQIDARGGNP 282

  Fly   407 EAIRLAQELTE 417
            |.:.|.:.|::
Human   283 ELVALVKHLSK 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
qlessNP_001287619.1 Isoprenoid_Biosyn_C1 117..435 CDD:294142 69/325 (21%)
GGPS1NP_001032354.1 polyprenyl_synt 9..251 CDD:395277 63/289 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0142
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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