DRSC/TRiP Functional Genomics Resources

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Protein Alignment qless and GGPS4

DIOPT Version :10

Sequence 1:NP_733425.1 Gene:qless / 43697 FlyBaseID:FBgn0051005 Length:436 Species:Drosophila melanogaster
Sequence 2:NP_179454.1 Gene:GGPS4 / 816379 AraportID:AT2G18640 Length:372 Species:Arabidopsis thaliana


Alignment Length:325 Identity:86/325 - (26%)
Similarity:131/325 - (40%) Gaps:62/325 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 SKANLRQ-----HSSVHTQQPAG-----PVREFQIDPYIIL---DDDLKYFYDDVRYLL-KSGTS 137
            |.||.|:     |..:.:...|.     ..||| :|..|.|   :||..:.:|...|:: |:.|.
plant    29 SPANTRRLIRLLHIPIKSPVAAAIFARKDTREF-LDSSIKLVNEEDDFGFSFDFKPYMISKAETI 92

  Fly   138 QPELD------------TIASYYFDGQGKALRPMVTMLMAKAINYHLNNESHQLVHKQRQIALFS 190
            ...||            ....|.....||.:||::.:...:.:    ..|....:    |.|...
plant    93 NRALDEAIPLIEPLNIHKAMRYAILAGGKRVRPILCLAACELV----GGEERLAI----QAACAV 149

  Fly   191 EMVHSASLVHDDV--IDQSDFRRGKPSVNALWNHKKVTMAGDYILSIASIMIARLRSDDVT---- 249
            ||:|:.||:.||:  :|..|.|||||:.:.::......::|..:|::|   ...|...||:    
plant   150 EMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVFGESVAILSGGALLALA---FEHLTEADVSSKKM 211

  Fly   250 ------IVLSQILTDLVQGEFMQLGSRETENE-------RFAHYLTKTYRKTASLIANALKATAV 301
                  :..|.....||.|:...|.|...|..       .:.|     ..||.||:..:....||
plant   212 VRAVKELAKSIGTKGLVAGQAKDLSSEGLEQNDVGLEDLEYIH-----VHKTGSLLEASAVIGAV 271

  Fly   302 IAQADDNVAEVAFQYGRNIGLAFQLVDDMLDFVSSTEQMGKPTAADLKLGLATAPVLFACEKYPE 366
            |....:...|....:.|.|||.||:|||:||...|:|::||....|...|..|.|.:...||..|
plant   272 IGGGTEKEIEKVRNFARCIGLLFQVVDDILDETKSSEELGKTAGKDKVAGKLTYPKVIGVEKSKE 336

  Fly   367  366
            plant   337  336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
qlessNP_733425.1 polyprenyl_synt 138..387 CDD:459773 68/260 (26%)
GGPS4NP_179454.1 IspA 80..372 CDD:439912 72/273 (26%)

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