DRSC/TRiP Functional Genomics Resources

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Protein Alignment qless and GGPS4

DIOPT Version :9

Sequence 1:NP_001287619.1 Gene:qless / 43697 FlyBaseID:FBgn0051005 Length:436 Species:Drosophila melanogaster
Sequence 2:NP_179454.1 Gene:GGPS4 / 816379 AraportID:AT2G18640 Length:372 Species:Arabidopsis thaliana


Alignment Length:325 Identity:86/325 - (26%)
Similarity:131/325 - (40%) Gaps:62/325 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 SKANLRQ-----HSSVHTQQPAG-----PVREFQIDPYIIL---DDDLKYFYDDVRYLL-KSGTS 137
            |.||.|:     |..:.:...|.     ..||| :|..|.|   :||..:.:|...|:: |:.|.
plant    29 SPANTRRLIRLLHIPIKSPVAAAIFARKDTREF-LDSSIKLVNEEDDFGFSFDFKPYMISKAETI 92

  Fly   138 QPELD------------TIASYYFDGQGKALRPMVTMLMAKAINYHLNNESHQLVHKQRQIALFS 190
            ...||            ....|.....||.:||::.:...:.:    ..|....:    |.|...
plant    93 NRALDEAIPLIEPLNIHKAMRYAILAGGKRVRPILCLAACELV----GGEERLAI----QAACAV 149

  Fly   191 EMVHSASLVHDDV--IDQSDFRRGKPSVNALWNHKKVTMAGDYILSIASIMIARLRSDDVT---- 249
            ||:|:.||:.||:  :|..|.|||||:.:.::......::|..:|::|   ...|...||:    
plant   150 EMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVFGESVAILSGGALLALA---FEHLTEADVSSKKM 211

  Fly   250 ------IVLSQILTDLVQGEFMQLGSRETENE-------RFAHYLTKTYRKTASLIANALKATAV 301
                  :..|.....||.|:...|.|...|..       .:.|     ..||.||:..:....||
plant   212 VRAVKELAKSIGTKGLVAGQAKDLSSEGLEQNDVGLEDLEYIH-----VHKTGSLLEASAVIGAV 271

  Fly   302 IAQADDNVAEVAFQYGRNIGLAFQLVDDMLDFVSSTEQMGKPTAADLKLGLATAPVLFACEKYPE 366
            |....:...|....:.|.|||.||:|||:||...|:|::||....|...|..|.|.:...||..|
plant   272 IGGGTEKEIEKVRNFARCIGLLFQVVDDILDETKSSEELGKTAGKDKVAGKLTYPKVIGVEKSKE 336

  Fly   367  366
            plant   337  336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
qlessNP_001287619.1 Isoprenoid_Biosyn_C1 117..435 CDD:294142 75/285 (26%)
GGPS4NP_179454.1 Trans_IPPS_HT 108..370 CDD:173833 66/245 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0142
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54105
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100316
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.680

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