DRSC/TRiP Functional Genomics Resources

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Protein Alignment qless and fdps

DIOPT Version :9

Sequence 1:NP_001287619.1 Gene:qless / 43697 FlyBaseID:FBgn0051005 Length:436 Species:Drosophila melanogaster
Sequence 2:NP_001020642.1 Gene:fdps / 552997 ZFINID:ZDB-GENE-050506-78 Length:356 Species:Danio rerio


Alignment Length:343 Identity:79/343 - (23%)
Similarity:122/343 - (35%) Gaps:84/343 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 DPYIILDDDLKYFYDDVRYLLKSGTSQPELDTIASYYFDGQGKALRPMVTMLMAKAINYHLNNES 176
            ||  :|.|.|....:.::|....|.....|..|.|         ||.:|:       ...|..|.
Zfish    38 DP--VLSDALNRLREVLQYNAPGGKRNRGLSVIGS---------LRELVS-------PSELPTEE 84

  Fly   177 HQLVHKQRQIALFSEMVHSASLVHDDVIDQSDFRRGKPSVNALWNHKKVTMAGD-----YIL--S 234
               ||:...:....|::.:..||.||::|.|..|||:|    .| :||..:..|     ::|  |
Zfish    85 ---VHRALLVGWCIELLQAFFLVADDIMDSSVTRRGQP----CW-YKKEAIGLDAINDAFLLEGS 141

  Fly   235 IASIMIARLRSDDVTIVLSQIL------TDLVQG-EFMQLGSRETENERFA--HYLTKTYRKTAS 290
            |..::....|.....:.|.::.      |:|.|. :.|.....:.:..||.  .|......|||.
Zfish   142 IYRLLRRHCRGQPYYVHLLELFTETSFQTELGQALDLMTAPPHKIDLNRFTMERYKAIVKYKTAF 206

  Fly   291 LIANALKATAVIAQADDNVAEVAFQYGRNI----GLAFQLVDDMLDFVSSTEQMGKPTAADLK-- 349
            .......|.|:.....:|  |:.....:.|    |..||:.||.||........|| ...|::  
Zfish   207 YSFYLPVAAAMYMAGIEN--EIEHHNAKTILLEMGEFFQIQDDYLDCFGDPAVTGK-IGTDIQDN 268

  Fly   350 ---------LGLATAPVLFACEKYPELNPMVMRRFSEPGDVER------AFELVHKSHGLEQTRF 399
                     ||:.|.      |:..||.....|  |:...|||      ..|:..:.|       
Zfish   269 KCSWLVVTALGIMTP------EQRAELEACYGR--SDAESVERVKALYDTLEMPMRYH------- 318

  Fly   400 LAKKHCNEAIRLAQELTE 417
               :|..|:....|:|.:
Zfish   319 ---QHEEESYHRLQKLIQ 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
qlessNP_001287619.1 Isoprenoid_Biosyn_C1 117..435 CDD:294142 77/338 (23%)
fdpsNP_001020642.1 polyprenyl_synt 53..314 CDD:278763 69/295 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0142
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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