DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ATPsynC and VMA16

DIOPT Version :10

Sequence 1:NP_651852.1 Gene:ATPsynC / 43693 FlyBaseID:FBgn0039830 Length:138 Species:Drosophila melanogaster
Sequence 2:NP_011891.1 Gene:VMA16 / 856421 SGDID:S000001068 Length:213 Species:Saccharomyces cerevisiae


Alignment Length:60 Identity:15/60 - (25%)
Similarity:30/60 - (50%) Gaps:6/60 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 AATVGVAGSGAGIGT-VFGSLIIGY-ARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFL 133
            |..||::..||..|. :.||.:||. .|.|    ::.:..::.....|.:.::.|::|.:
Yeast    65 ALCVGLSVVGAAWGIFITGSSMIGAGVRAP----RITTKNLISIIFCEVVAIYGLIIAIV 120

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATPsynCNP_651852.1 ATP9 62..138 CDD:164765 15/60 (25%)
VMA16NP_011891.1 ATP-synt_Vo_c_ATP6F_rpt1 59..121 CDD:349417 15/60 (25%)
ATP-synt_Vo_c_ATP6F_rpt2 141..>192 CDD:349418
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.